| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1740 |
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| Symbol | |
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| ID | 1220578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1862281 |
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| End bp | 1863270 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238132 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_519861 |
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| Protein GI | 17546459 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.324025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCT TCACGCACGT CTTCCGCCCC GTCGCGCTGG CCGCCCTGGC CGCGCTGCCG
ATGGCGCTTC TGCAAGCCAC GCCCGCCCTG GCGCAAGCCG CCAAGTCGGT CGAAGTGCTG
TCGATCGTCG AACACCCGGC GCTCGACGCC ATCCGCGACG GCGTCAAGGA AGAGCTGAAG
GCCCAGGGCT TCGACGCCGG CAAGAACCTG AAGTGGGAAT ACCAGAGCGC GCAGGGCAGC
GCCGCCACCG CCGCGCAGAT CGCCCGCAAG TTCATCGGCG ACAAGCCGGA CGCCATCGTC
GCCATCACCA CGCCGGCGGC GCAGGCCGTG GTGGCGGCCA CCAAGACCGT CCCGGTGGTG
TATGCCGGCG TGACCGATCC GGTGGCCGCG CAGCTGGTCA AGAGCTGGGA GCCGTCGGGC
ACCAACGTGA CCGGCGTATC CGACAAGCTG CCGCTGGACA AGCAGATCGC CCTGATCAAG
CGCGTGGTGC CGCACGCCAA GCGCGTCGGC ATGATCTACA ACCCGGGCGA GGCCAACTCG
GTGGTGGTCG TCAATGAACT GAAGAAGCTG CTGTCGGCCC AGGGCCTGAC GCTGGTGGAA
TCGGCCGCGC CGCGCACGGT CGATATTGCC CCGGCAACCA AGAACCTGAT CGGCAAGGTG
GACGTGATCT ACACCAGCAC CGACAACAAC GTGGTGTCGG CGTACGAATC GCTGGTGAAG
GTGGCCAACG AGGCCAAGAT TCCGCTGGTC GCCGCCGACA CCGACAGCGT CAAGCGCGGC
GCCATCGCGG CGCTGGGCAT CAACTACTAC AGGCTCGGCC GCCAGACCGG CACCGTGGTC
GCGCGCATTC TGAAGGGCGA GAAGCCGGGC GCGATCGCCT CGACCGGCAG CACCGACCTG
GAACTGTTCG TGAACCCGGG CGCGGCCGCC AAGCAAGGCG CCACGCTGTC GGCAGACCTG
CTCAAGGACG CCAAGGAAAC CGTCAAGTAA
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| Protein sequence | MSRFTHVFRP VALAALAALP MALLQATPAL AQAAKSVEVL SIVEHPALDA IRDGVKEELK
AQGFDAGKNL KWEYQSAQGS AATAAQIARK FIGDKPDAIV AITTPAAQAV VAATKTVPVV
YAGVTDPVAA QLVKSWEPSG TNVTGVSDKL PLDKQIALIK RVVPHAKRVG MIYNPGEANS
VVVVNELKKL LSAQGLTLVE SAAPRTVDIA PATKNLIGKV DVIYTSTDNN VVSAYESLVK
VANEAKIPLV AADTDSVKRG AIAALGINYY RLGRQTGTVV ARILKGEKPG AIASTGSTDL
ELFVNPGAAA KQGATLSADL LKDAKETVK
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