| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1737 |
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| Symbol | |
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| ID | 1220575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1859247 |
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| End bp | 1860308 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238129 |
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| Product | putative transmembrane outer membrane porin signal peptide protein |
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| Protein accession | NP_519858 |
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| Protein GI | 17546456 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.172575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA CCTCGATGGC GCTGGCGGCG GCCGCGCTGG CGACCGCCGG CACCGCGGCG
GCCCAATCCA ACGTGACCCT GTACGGCATC ATGGATGCCG GCATCGAATA CGTGAACCAC
GCCGGCGCCA ACGGCGGCGG CGCGGCCCGC CTGGTGTCGG GCGGCAAGAA CACCTCGCGC
TGGGGCCTGC GCGGCAGCGA AGACCTGGGC GGCGGGCTGA AGGGCATCTT CAACCTCGAG
AGCGGCATCG CCATCGACAC CGGCCGGCTC GACACCGACA ACACGCTGTT CGACCGCCGC
GCCGTGGTCG GGCTGGCGGG CAGCTTCGGC CAGGTGGTGT TCGGCCGCAC CTTCACCACC
ACCTACGACT TCATGCTGCC CTACGACCCG ATGGGCTATG CGCCCAACTA CTCGTGGGCG
ACCTCGTCGA CGGCCACCGG CGACCGCAAG GACGGCCTGT TCTCGCGCGC CTCCAACGCG
GTGCGCTACG ACGGCACCTT CGGCGGCCTG AAGCTCGGCG CCACGGTCGG TTTTGGCGAG
GTGGCGGGCA ACTTCAATAG CTCGTCCAAG TATGACGTGG GCATCGGCTA CAGCGCGGGC
GGCTTCTCGG CGGCCGCCAC GTGGGACCGC CAGAACGGCG CCGGCACGAG CACCACGCCG
GCCGACACCA CCGACTACAT CCAGGGCATC CACGCCGGCG CCAGCTATGA CTTCGGCGCG
CTCAAGCTGT TCGCGGGCTA CCGCAACTAC AAGCGCGCCT TCACCACGGC CGCGGCCACG
CAGCGCAGCG ATATGTACTG GGCCGGCGCC AGCTACGATT TCACGCCGGC GTTCACGCTG
TTCGGCGCGG TCTACAAGCA GAACATCAAG GGCGGCACCG ATGCCGACCC GATCCTGTTC
TCGCTGCGCG CGCAATACGC CTTGTCCAAG CGCACCACGG CCTACCTGGC CGGCGGCTAC
GCCAAGGCGA GGAACGGCCA GAACGTAAGC CTGTCGCGCG ATGTGGCCGG CTTCGGCAAC
AGCCAGGTCG GCGTGACGGC GGGCCTGCAG CACCGCTTCT GA
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| Protein sequence | MKITSMALAA AALATAGTAA AQSNVTLYGI MDAGIEYVNH AGANGGGAAR LVSGGKNTSR
WGLRGSEDLG GGLKGIFNLE SGIAIDTGRL DTDNTLFDRR AVVGLAGSFG QVVFGRTFTT
TYDFMLPYDP MGYAPNYSWA TSSTATGDRK DGLFSRASNA VRYDGTFGGL KLGATVGFGE
VAGNFNSSSK YDVGIGYSAG GFSAAATWDR QNGAGTSTTP ADTTDYIQGI HAGASYDFGA
LKLFAGYRNY KRAFTTAAAT QRSDMYWAGA SYDFTPAFTL FGAVYKQNIK GGTDADPILF
SLRAQYALSK RTTAYLAGGY AKARNGQNVS LSRDVAGFGN SQVGVTAGLQ HRF
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