| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1734 |
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| Symbol | |
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| ID | 1220572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1855381 |
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| End bp | 1856472 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238126 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | NP_519855 |
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| Protein GI | 17546453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.281801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG ACGACGTGAT CGTCAGCTTT CGCGGTGTGC GCAAGACCTA CGACGGCGAG
ACCCTGGTGG TCAAGCACCT GGACCTGGAC ATCTATCAGG GCGAGTTCCT GACGCTGCTC
GGCCCGTCCG GCTCCGGCAA GACGACCTGC CTGATGATGC TGGCCGGCTT CGAGTTTCCG
ACCGGCGGCG AGATCCGCCT CGAAGGCACC CTGCTCAACA CCGTGCCGCC GCACAAGCGC
AACATCGGCA TGGTGTTCCA GAACTACGCG CTGTTCCCGC ACCTCACGGT CGCGCAGAAC
GTCGAGTACC CGCTCACCGT GCGCAAGCTT GCCGCCGCCG AGCGCGCCGA GCGTGTCCAC
CATGCCCTGA AGATGGTGCG CATGGAGGGC TTCGCCAAGC GCTATCCCGC GCAGCTCTCC
GGCGGCCAGC AGCAGCGCAT CGCCCTGGCG CGCGCGCTGG TGTTCGAGCC CAAGCTGGTG
CTGATGGACG AACCGCTCGG CGCGCTCGAC AAGCAGCTGC GCGAGCATAT GCAGTACGAG
CTGAAGTCGC TGCACGAGAA GCTGGGCGTG ACCTTCGTCT ACGTCACGCA CGACCAGGGC
GAGGCGCTGA CCATGTCCGA CCGCGTGGCC GTGTTCGACA AGGGCGTGGT GCAGCAGCTC
GACACGGTCG ACCGCCTCTA CGAATCCCCC TGCAACGCAT TCGTCGCCAA CTTCATCGGC
GACAGCAACA CGCTGCGCGG CACTGTCGTC GGCCTCGACG GCGACTACTG CCAACTGCAA
TTGAACGACG GCGCGCGCGT GATCGGCCGC AACGTCGCCG GCGCGCCGGT CGGGGCCGCC
GCCGTCGGCT GCATCCGGCC CGAGCGCATG CGCCTGGCCG AGCCCGCCGA TGCCGGCGCC
GGCAACGCGC TCGCCGGCCA GACGCGCGGC CTGGTGTATT TCGGCGACCA CGTCCGCATG
CGCTGCGCCC TGCCCGAGCA GGCGGAGTGC TTCGTCAAGG TGCCGCTCGG CACGCGCGCG
CTCGAATCGT TCGCGCCGGG CGCGCCGATC CGGCTGGAAT TCGCGCCCGA GCACCTGCGC
GTCTTCACCT GA
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| Protein sequence | MKTDDVIVSF RGVRKTYDGE TLVVKHLDLD IYQGEFLTLL GPSGSGKTTC LMMLAGFEFP
TGGEIRLEGT LLNTVPPHKR NIGMVFQNYA LFPHLTVAQN VEYPLTVRKL AAAERAERVH
HALKMVRMEG FAKRYPAQLS GGQQQRIALA RALVFEPKLV LMDEPLGALD KQLREHMQYE
LKSLHEKLGV TFVYVTHDQG EALTMSDRVA VFDKGVVQQL DTVDRLYESP CNAFVANFIG
DSNTLRGTVV GLDGDYCQLQ LNDGARVIGR NVAGAPVGAA AVGCIRPERM RLAEPADAGA
GNALAGQTRG LVYFGDHVRM RCALPEQAEC FVKVPLGTRA LESFAPGAPI RLEFAPEHLR
VFT
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