| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1733 |
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| Symbol | |
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| ID | 1220571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1854256 |
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| End bp | 1855296 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238125 |
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| Product | putative lipoprotein signal peptide |
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| Protein accession | NP_519854 |
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| Protein GI | 17546452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0848422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA TCGCGAAGAC GCGCCTGAGC TTGCTCGCCG CAGCATTCGC CGTCGCCTGC
GGCGCGCACG CGGCGGAGGT CACCGTCGTC AACTTCGGCG GCGCCAACGG CGACGCGCAG
AAGGCCGCAT TCAACAAGCC GTTCGAGGCG CAGACCGGCA ACAAGGTCAC CGCCGTCGAG
TACAACGGCG AGCAGGCCAA GATCAAGGCC ATGGTCGAAG CCAAGCACGT CAACTGGGAC
GTGGTCGAAG TCGAGTCGGG CGACATCGGC CGCGGCTGCG ACGAGGGCCT GTTCGAGAAG
CTCGACTGGT CCAAGATCGC CAAGAAGGCC GACCTGGTGC CCGAGGCGCC GCACACCTGC
GGCGTCGGCT TCTTCGTCTG GTCGACGGCG CTGGCCTACA ACGCCGACAA GCTCAAGGCC
GCCCCCAGCG GCTGGGCCGA CTTCTGGGAC GTGAAGAAAT TCCCGGGCAA GCGCGGCATG
CGCAAGGGCG CGCGCTACAA CCTGGAGTTC GCGCTGATGG CCGACGGCGT GCCGGTCAAG
GACGTCTACA AAGTGCTCGC CACCAAGGAC GGCCAGAACC GCGCCTTCAA GAAGCTCGAC
CAGCTCAAGC CCTACATCCA GTGGTGGGAA GCCGGCGCGC AGCCGCCGCA GTTCCTGGTG
GCCGGCGACG TGGTGATGTC CACCGCCTTC AACGGCCGCA TCGACGCCGC GCAGCGCGAA
GGCAAGAACC TCAAGGTGGT CTGGAACGGC AGCATCTACG ACCTGGACTA CTGGGCGATC
CCCAAGGGCA CGCCGAACAA GGCGCTGGCC GAGCAGTACA TCGCCTACAC GCTGTCGCAG
AAGGCCCAGC AGGAATACGC CAAGCACATC GCCTACGGCC CGGCCAACCT GGCCGCGATC
AAGGCGCTCG ATGCGAAGAC CCAGGCCAAC CTGCCCAACT CGCCCGAGAA CGGCAAGAGC
GCGGTGCTGC AGAACCTGCA GTTCTGGACC GACCACGGCG ATGAGCTGGA GCAGCGCTTC
GCCTCGTGGG CATCGAAGTA A
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| Protein sequence | MKPIAKTRLS LLAAAFAVAC GAHAAEVTVV NFGGANGDAQ KAAFNKPFEA QTGNKVTAVE
YNGEQAKIKA MVEAKHVNWD VVEVESGDIG RGCDEGLFEK LDWSKIAKKA DLVPEAPHTC
GVGFFVWSTA LAYNADKLKA APSGWADFWD VKKFPGKRGM RKGARYNLEF ALMADGVPVK
DVYKVLATKD GQNRAFKKLD QLKPYIQWWE AGAQPPQFLV AGDVVMSTAF NGRIDAAQRE
GKNLKVVWNG SIYDLDYWAI PKGTPNKALA EQYIAYTLSQ KAQQEYAKHI AYGPANLAAI
KALDAKTQAN LPNSPENGKS AVLQNLQFWT DHGDELEQRF ASWASK
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