| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1711 |
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| Symbol | clpP |
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| ID | 1220547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1828245 |
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| End bp | 1828898 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637238101 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | NP_519832 |
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| Protein GI | 17546430 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0549127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0370612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGCA ATGAACTGAT CGACCAACTC GCCCGCACCC AGGCTTCCGC GCTTGAAACG
CAGGGCCTCG GACTGGTGCC GATGGTGGTC GAGCAGTCGG GCCGCGGCGA ACGCGCCTAC
GACATCTACT CGCGTCTGCT CAAGGAGCGC GTGATTTTCA TGGTGGGCGA GGTCAACGAC
CAGACTGCCA ATCTCGTGGT GGCGCAGTTG CTGTTCCTGG AGAGCGAGAA TCCGGACAAG
GACATCTCGC TGTACATCAA CTCGCCGGGC GGTTCGGTGT CGGCGGGCCT GGCGATGTAC
GACACGATGC AGTTTGTCAA GCCCGACGTG TCCACGTTGT GCATGGGCAT GGCCGCCAGC
ATGGGCGCGT TCCTGCTGGC CGCCGGCGCG AAGGGCAAGC GCTATGCGCT GCCGAACTCG
CGGATCATGA TTCACCAGCC GCTGGGCGGT GCGCGCGGCC AGGCCTCGGA TATCGAGATC
CAGGCGCGTG AAATCCTGTA CCTGCGCGAA CGTCTGAACA CGATCCTGTC CGAAGTCACC
GGCCAGCCCG TGGACAAGAT CGCCCGCGAT ACGGACCGCG ACAATTTCAT GAGCGGCGAT
CAGGCCAAGG AGTACGGCCT GATCGACAAG GTGCTGGCTC GGCGGGGTGC CTGA
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| Protein sequence | MIRNELIDQL ARTQASALET QGLGLVPMVV EQSGRGERAY DIYSRLLKER VIFMVGEVND
QTANLVVAQL LFLESENPDK DISLYINSPG GSVSAGLAMY DTMQFVKPDV STLCMGMAAS
MGAFLLAAGA KGKRYALPNS RIMIHQPLGG ARGQASDIEI QAREILYLRE RLNTILSEVT
GQPVDKIARD TDRDNFMSGD QAKEYGLIDK VLARRGA
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