| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1692 |
|---|
| Symbol | |
|---|
| ID | 1220528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1810164 |
|---|
| End bp | 1810841 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637238082 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519813 |
|---|
| Protein GI | 17546411 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5301] Phage-related tail fibre protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.705113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.448479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTGC AGCTCCAGAA AATCAACCTC GGTACCCCAC CGCTAGGCAG GGATGGGAAC
ACCAACCGCG AGTGCAACGC GAAGACCAAC GACAACATGG CCGCGATCGA GGCCTTTGCC
AACACGCTGG CGGGCGATGT CAGTGAGCTG ACCAGCAATA CGGGGGCGCT TGCGGATGAC
ATGCGGGCGC TGACGGGGGC GGTTGCCATG TTCGCCTGCA AGACGCCGCC CGCTGGCTGG
CTCAAGGGCA ATGGAGCGGC CGTCTCCCGC ACAACCTACG CGCGGCTTTT CGGCGTGATC
GGCACCACGT TCGGCGCGGG CGACGGATCG ACGACATTCA ATCTCCCGGA ACTGCGTGCG
GAGTTCCCGC GCGGCTGGGA TGACGGGCGC GGTGTTGATG CCGGGCGGGT GTTCGGATCG
GTGCAGGCTC AGGCGTTGAG CTCGCACCAG CACAAGACCG CGATCGGTTT TGACGGCAGC
AACCTGTTCG GTTGGGGCGA CGGCAATGCG ACCCCGATTT TCGGCTCAGA GGTGCAGTCC
GGTGTGCTGC GGGTCGTCGG GTCCGTGACG CAAAGCGGCG GGGCTGCCCG CGTCGCCTAC
ACGGATGCGG CGCTGATGGG CGTGAGCGGC GAGACCCGCC CGCGCAACGT GGCACTGCTC
GCCTGCATCA AATACTGA
|
|---|
| Protein sequence | MTLQLQKINL GTPPLGRDGN TNRECNAKTN DNMAAIEAFA NTLAGDVSEL TSNTGALADD
MRALTGAVAM FACKTPPAGW LKGNGAAVSR TTYARLFGVI GTTFGAGDGS TTFNLPELRA
EFPRGWDDGR GVDAGRVFGS VQAQALSSHQ HKTAIGFDGS NLFGWGDGNA TPIFGSEVQS
GVLRVVGSVT QSGGAARVAY TDAALMGVSG ETRPRNVALL ACIKY
|
|---|
| |