Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1680 |
Symbol | |
ID | 1220516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1797957 |
End bp | 1798331 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238070 |
Product | phage phi-105 holin-like protein |
Protein accession | NP_519801 |
Protein GI | 17546399 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.376636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCCA AGGCACCGCG CCCGTGCCGT GTGCCGGGCT GTCCCAAGTA CGCCGCACCC GGCGGCGCCT ACTGCGAGGA ACACGCGGTC CAACGGCACG AGACAGAGGT TGCCCGCCGT GGCACAGCTG CGAGTCGCGG CTACGGATCG AAGTGGCAGC GCGAGCGGCT CGAGTACCTG AAGCGCAACC CGATCTGCGT GGAGTGCAAG AGGGGTGGCC ACGTGGTGCC GGCCAAGGTT GTCGACCACA TCGTGCCGCA CAAGGGCGAT CAGCATCTGT TCTGGCGCCG CAGCAACTGG CAGGCGCTGT GCAAGACGTG CCACGACCGC AAGACGGCGC GCGAGGACGG CGGGTTCGCC AACCCGAGGC GCTGA
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Protein sequence | MPPKAPRPCR VPGCPKYAAP GGAYCEEHAV QRHETEVARR GTAASRGYGS KWQRERLEYL KRNPICVECK RGGHVVPAKV VDHIVPHKGD QHLFWRRSNW QALCKTCHDR KTAREDGGFA NPRR
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