| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1671 |
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| Symbol | TIS1421b |
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| ID | 1220507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1792212 |
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| End bp | 1792598 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238061 |
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| Product | TIS1421-transposase protein B |
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| Protein accession | NP_519792 |
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| Protein GI | 17546390 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0971457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGTTGG CGCTGATGGT CACCGGTGCC AATCGTCACG ACTCGGTGGT GTTCGAGGTG
CTCGTTGACG CCATCCCGAG CGTGCCCGGA CTCGATGGCC GCCCGCGATG CCGCCCCGAC
AAGCTTCACG CGGATAAGGG ATACGACTTC GCGCGATGCC GCCGGCATCT GCGCAAGCGG
GGCATGACTC CCCGGATCGC TCGCCGTGGC ATCGAGAAGA ACGACCGGCT CGGCAAGCAT
CGCTGGGTGG TCGAACGCAC CCATGCCTGG CTTGCTGGAT TCGGCAAGTT GCGCATTCGT
TTCGAGCGTT CTCTTCAGAC TCACCTCGCT TTGCTCACCC TGGCTTGCGC CGTCATCTGC
GGACGATTTG TTGATCGGTT TTGTTAG
|
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| Protein sequence | MPLALMVTGA NRHDSVVFEV LVDAIPSVPG LDGRPRCRPD KLHADKGYDF ARCRRHLRKR
GMTPRIARRG IEKNDRLGKH RWVVERTHAW LAGFGKLRIR FERSLQTHLA LLTLACAVIC
GRFVDRFC
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