| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1653 |
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| Symbol | |
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| ID | 1220488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1777212 |
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| End bp | 1778420 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238042 |
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| Product | putative transport/efflux transmembrane protein |
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| Protein accession | NP_519774 |
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| Protein GI | 17546372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.493931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGT TGCGCCTGCC GTACCCGCAT TCCGACTCCA CCGGTTCTTT TTTCGCGCCG
TTTCTGCCGC GCAGGCGCGC TTTTCCTGCT GTTTCCGGGG CGCTTCTCCT GGGGGGCGCG
CTGCTGTTGG CGGGGTGCGG CAAAGAGCAA CCCAAGGCAC CCGAGGTGCG GCCGGTCCGG
ACCATGACCG TGGTCAGCGA GCAGGCCGCC GGTACCGTCG AATTCTCCGG CGATGTGCGC
CCGCGCGTCG AGTCGCGGCT GGGTTTCCGC GTGCCGGGCA AGATCATCGC GCGGCTGGTG
GACGTTGGCG CCACGGTCAG GAAAGGCCAG GTGCTGGCGC GGCTGGACCC GACCGACCTG
GCGCTGGCGC AGCAATCCGC CCAGGCGCAG TTGCAGGCGG CCAAGACCGA CCGCGATCTG
GCGGCGTCCG ACCTCAAGCG TTTTTCCGAA CTGTTCGCCA AGGGCTTCAT CAGCGCGGCC
GAGCAGCAGC GCCACCAGGC CAATTACGAT GCAGCCCAGG CGCGCTACGA CCAGGCGGTC
GCGGGCTACC GCAACCAGTC CAACCAGGCG GCCTATGCCA CGCTGGAAGC CGACGCCGAT
GGCGTGGTGA CGAGCGTGGA TGCCGAGGTC GGCCAGGTGG TCACCGCCGG CCAGCCGGTG
GTGCGCGTGG CGCAGACGGC CGAGAAAGAG GTGGTGGTCG GCATTCCCGA AGACCAGGTC
GATGCGCTGC GCAAGTCGCC CGACGTGCGC GTCAAGCTGT GGGCCGACCC GTCGCGCAGC
CTGCCCGGCA AGGTGCGCGA GATCGCGCCG GCGGCCGACC CCGTCACGCG GACATACACC
GTGAAGATCA CCGTGCCGAA TCCGCCGCCC GATCTCAAGC TGGGCATGAC GGCGGTGGCC
ACCTTCGTGC GTCCGGGCGG CGGCGCGGAC AGCGGCGGCA TGGGCGTGCG CGTACCGATC
ACGGCCTTGC TGCAGGAGCA GGGCAAAAAC GTGGTGTGGC TCTATGACGC GGCGTCGCAG
ACGGTCAAGC CGGTGCCGGT GACGGTGGGC GCGCCGCGCG ACAACGTGCT GCTGGTGACC
GGCGGCCTGT CGCCCGGCCA GACCATCGTC ACGGCGGGTG TGCATCTGCT CAAGGCCGGC
CAGCACGTGA TGCCGATGGC GGCGGCGGAC CAGCCGTCGG CCCAGTCGGC CATCACGCCG
CGGCGCTGA
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| Protein sequence | MPVLRLPYPH SDSTGSFFAP FLPRRRAFPA VSGALLLGGA LLLAGCGKEQ PKAPEVRPVR
TMTVVSEQAA GTVEFSGDVR PRVESRLGFR VPGKIIARLV DVGATVRKGQ VLARLDPTDL
ALAQQSAQAQ LQAAKTDRDL AASDLKRFSE LFAKGFISAA EQQRHQANYD AAQARYDQAV
AGYRNQSNQA AYATLEADAD GVVTSVDAEV GQVVTAGQPV VRVAQTAEKE VVVGIPEDQV
DALRKSPDVR VKLWADPSRS LPGKVREIAP AADPVTRTYT VKITVPNPPP DLKLGMTAVA
TFVRPGGGAD SGGMGVRVPI TALLQEQGKN VVWLYDAASQ TVKPVPVTVG APRDNVLLVT
GGLSPGQTIV TAGVHLLKAG QHVMPMAAAD QPSAQSAITP RR
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