| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1651 |
|---|
| Symbol | |
|---|
| ID | 1220486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1775018 |
|---|
| End bp | 1776202 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637238040 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519772 |
|---|
| Protein GI | 17546370 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.500036 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTC GCGATTTTCT GAAAGCGGGT GCGATGCTCG GCATGGGTGG CGCGCTGCCG
GGCGTTGTCT TTGCGCAAGG GCGGGGCAAG CGCAATGGGT ACGGCAACCT GCTGATCCTG
ATCGAGCTCA AGGGCGGCAA TGACGGGCTC AACACCGTGG TCCCGTATAC CAGCGCGCAG
TACTACGCGC TGCGCCCGCG CATCGCCATC AAGCGCGAGC AGGTGCTGCA GCTCGACGAT
CGCTATGGCC TGCATCCGTC CCTGCAGCCG CTGATGCCGC TGTGGCAGGC GGGCGAGCTC
TCGGTGGTGC AGGGGCTGTC GTATCCGCAG CCCAATCTGT CGCATTTCCG CTCCATCGAG
ATCTGGGACA CCGCCTCGCG CGCCGACCAG TATCTGCACG AAGGGTGGCT GACGCGGGCG
TTCGCAGCCC GGCCGGTGCC CGCCTCGTTC GGCGCGGATG GCGTCATCAT CGGCAGCGCG
GATCTCGGCC CGCTGGACGG CGGCGCCCGC GCCGTGGCGC TGGCCAGCCC GGATGCCTTC
CTCAACGAAG CCAGGCTGGC GATGCCGTCG AACGCCACGG GCAATGCAAC GCTCGCGCAC
GTGCTGAAGG TCGAGGCGGA CATCGTCAAG GCTGCCGATG GCCTGCGTCC CAAGGGCGGC
AAGTTCGACT TCAAGACGCG CTTTTCGGAG ACCGCCTTCG GCAACGCCAT CAAGGCCGCC
ATGCAGGTGG TGGCGGCCCC CGGGCGCGGC GGCTCGGATG TGGCGGCGGT GTGCCTGTCG
CTGGGCAGTT TCGATACCCA CACCAACCAG CTGGTGGCGC AGAACAACCT GCTGCGGCAG
CTCGGCGATG GCATCGCGAC GCTCAAGAGC GCGCTGACGG AGCTCGGGCG CTGGGACGAT
ACGCTGATCG TCACCTACTC CGAATTCGGC CGCCGCCCGC GCGAGAACCT GAACAACGGC
ACCGACCACG GCACTGCCTC CGCGCATTTC GTGGCGGGCG GGCGGGCCAA GGGCGGGCTG
GCCGGGCAGG GGCCGGTGCT CGAGCGGCTG GACGGCAGCG GCAACCTGGA GCCGTCGGTC
GATTTCCGCT CGCTCTACGC GACCGTGCTG GAGCGCTGGT GGGGCATGGA TTCGCGGTCG
GTGCTGGCTG GCCGCTTCGC CCCGCTGGAT CTGATCAAGG CCTGA
|
|---|
| Protein sequence | MERRDFLKAG AMLGMGGALP GVVFAQGRGK RNGYGNLLIL IELKGGNDGL NTVVPYTSAQ
YYALRPRIAI KREQVLQLDD RYGLHPSLQP LMPLWQAGEL SVVQGLSYPQ PNLSHFRSIE
IWDTASRADQ YLHEGWLTRA FAARPVPASF GADGVIIGSA DLGPLDGGAR AVALASPDAF
LNEARLAMPS NATGNATLAH VLKVEADIVK AADGLRPKGG KFDFKTRFSE TAFGNAIKAA
MQVVAAPGRG GSDVAAVCLS LGSFDTHTNQ LVAQNNLLRQ LGDGIATLKS ALTELGRWDD
TLIVTYSEFG RRPRENLNNG TDHGTASAHF VAGGRAKGGL AGQGPVLERL DGSGNLEPSV
DFRSLYATVL ERWWGMDSRS VLAGRFAPLD LIKA
|
|---|
| |