| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1650 |
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| Symbol | |
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| ID | 1220485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1773374 |
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| End bp | 1774990 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238039 |
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| Product | signal peptide protein |
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| Protein accession | NP_519771 |
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| Protein GI | 17546369 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.556039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTT CTGGCTGGAC GACGATTCCG ATGGCGCTGG CGGTGGCCGG CGTTCTGGCC
CACCTGCAGG CGCAGGCGCA GGTTCCAGCG CGGCACGAGC ACCGGGCCAG CCGCGCCACG
GCGCAGGCCG TCGAGGCGCA GCGCCTGGAC CGTGACGACG CGCGCTTCTT CCTGACCCGC
ACCGGTTTCT CGCCCACGGA GAGCGAGCTC GACGCCTACG CCGGCCTGAC CCGCCGCGAG
GCCGTCGACC GCGTGCTGGC CCAGACCGGC ACCGTCGCCA CCCAGCCGTT GCCGGCATGG
ATCAACGAGC CGATCGTCAC GGACGACAAG CAGGCTAATG ACGAGGCTCG CAAGGTGGCC
CGGCAGAAGA ATCTCGCGCG GGAACTCGAA ATGCGCGGCT GGTGGATCAG CGAGATGATC
AGGACGCCGT CCCCGCTGAC CGAGCGGATG ACGCTGTTCT GGCACAACCA TTTCGTATCC
AGCTCGCAGA AGGTGGTGTT CGCGCAGCTG ATGTATCGGC AGAACGTGCT GCTACGGCAG
AACGCGGTCG GCAACTTCGG GACGATGCTG CATGCCGTCA GCAAGGACCC GGCGATGCTG
GTCTACCTGG ATGCCGCCTC GAGCCGCAAG GGCAAGCCCA ACGAGAACTT CGCCCGCGAA
GTGATGGAGC TCTTCACACT GGGCGAGGGC CACTACACCG AACAAGACAT CAAGGAAGCC
GCGCGCGCCT ACACCGGCTG GAGCGTGGAC CGCGAGCACG ACTACGCCTA TGTCTGGCTG
CCGCAGCTGC ATGACACCGG CACCAAGACG GTGTTCGGCC GCAGCGGCGA CTACGACGGC
GACCAGATGC TCGATGTCCT GCTGGCGCGG CAGGAAACCG CCGTGTTCAT CGTGACCAAG
CTGTGGCGCG AGTTCGTCTC GCCCGATCCG GACGCGGCGC AGGTCGCGCA CGTCGCCGAG
GCCTTCCGCT CCAGCGGCTA CGACATCAAG GTGGCGCTGC GCGAGCTCTT CATGACGCAG
GCGTTCTGGG CGCCGCAGAC GCGCGCGACG CTGGTGAAGT CGCCGGTGGA GATGATCGTC
GGTACGCTCA AGCAGTTCAA CGTGCAGTAT TCGGACCCGG CGCCGTTCGC GATCAAGTCC
GCGCAGCTGG GGCAGAACCT GTTCGCCCCG CCCAACGTGA AGGGCTGGCC GGGCGGCGAT
GCGTGGATCA ACTCCAACAC GCTGCTGGGC CGCAAGCAGT TCCTCGACCA GCTGTTTCGC
TCCACCGAGA TGAAGGCGCC GCCGGCGCAG GCGCAGAAGC CCGGCGTGAT GATGGCGGCC
ATGCGCGAGG ACCTGAAGCA GGGCGGCCCC GTGCCGGGCC TGGGCGCGGC GTTGAAGGGC
ATGGGCCCGG AGGGCCGCTT CAAGCTGGCG CAGTCGCAGA CCATGGTGTC GTTCAATGCG
GCCAGGTGGC TGGCCCAGTT CGGCGCCGAG GCCAACGATC CGCCCCAGCT GGGGCCGCGC
CTGTCCATCC AGCATGCCGT GCTGCCGGTC GACCCCACGG TGCCGATTCC CGTCAAGCTG
GCCGGTGCCG CTTATCTGCG CACGCTGTTG ATGGATCCGG CCTATCAACT CAAGTGA
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| Protein sequence | MRISGWTTIP MALAVAGVLA HLQAQAQVPA RHEHRASRAT AQAVEAQRLD RDDARFFLTR
TGFSPTESEL DAYAGLTRRE AVDRVLAQTG TVATQPLPAW INEPIVTDDK QANDEARKVA
RQKNLARELE MRGWWISEMI RTPSPLTERM TLFWHNHFVS SSQKVVFAQL MYRQNVLLRQ
NAVGNFGTML HAVSKDPAML VYLDAASSRK GKPNENFARE VMELFTLGEG HYTEQDIKEA
ARAYTGWSVD REHDYAYVWL PQLHDTGTKT VFGRSGDYDG DQMLDVLLAR QETAVFIVTK
LWREFVSPDP DAAQVAHVAE AFRSSGYDIK VALRELFMTQ AFWAPQTRAT LVKSPVEMIV
GTLKQFNVQY SDPAPFAIKS AQLGQNLFAP PNVKGWPGGD AWINSNTLLG RKQFLDQLFR
STEMKAPPAQ AQKPGVMMAA MREDLKQGGP VPGLGAALKG MGPEGRFKLA QSQTMVSFNA
ARWLAQFGAE ANDPPQLGPR LSIQHAVLPV DPTVPIPVKL AGAAYLRTLL MDPAYQLK
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