| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1646 |
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| Symbol | ahpC2 |
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| ID | 1220481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1769837 |
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| End bp | 1770529 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238035 |
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| Product | putative alkyl hydroperoxide reductase (subunit C) oxidoreductase protein |
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| Protein accession | NP_519767 |
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| Protein GI | 17546365 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.188093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCCGG GCACGACGGA TGCTTGGCCG ATTGCAGCAC ATTCACCCAT CGTTGCCGGC
CGCGTCCGCC CGCCGCTTGC CTGCCTGGCC GGCGCGCTTC TTGTTTGCAG GACGCCGTCC
GCTGCGCCCC CTCAGGAGAA GCCCATGAAG ACCATTGGTG ACAAGCTCGA GCCGTTCAAG
GTGATCGGTG TCAAGCCGGG GTTCAACCGC CATGAGGAAA ACGGCCAGTC GGCGTTCGAA
GACATCACTG AGGCATCGTT CCCGGGCAAG TGGAAGGTCA TCTATTTCTA CCCGAAGGAC
TTCACCTTCG TGTGCCCGAC CGAGATCGTC GCCTTCGCCA GGCTGAATCA GGACTTCGAA
GACCGCGACA CCGTCGTGCT GGGCGGCTCG ACCGACAACG AATTCGTCAA GCTGGCCTGG
CGCCGCGAGC ACAAGGACCT CGACCGGCTG AAGCAATGGT CGTTCGCCGA CACCACCGGC
GCGCTGATCG ACCAGCTGGG CGTGCGCGAG CACGAAGCCG GCGTCGCGCT GCGGGCCACG
TTCATCGTCG ATCCGGACAA CGTGATCCAG CACGTCTCGG TGAACAACCT GAACGTGGGC
CGCAACCCGG ATGAAGTCCT GCGCATCCTC GACGCCCTGC AGACCGACGA GCTGTGCCCG
TGCAACCGCG CCGTCGGCGG CGCCACGCTC TGA
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| Protein sequence | MRPGTTDAWP IAAHSPIVAG RVRPPLACLA GALLVCRTPS AAPPQEKPMK TIGDKLEPFK
VIGVKPGFNR HEENGQSAFE DITEASFPGK WKVIYFYPKD FTFVCPTEIV AFARLNQDFE
DRDTVVLGGS TDNEFVKLAW RREHKDLDRL KQWSFADTTG ALIDQLGVRE HEAGVALRAT
FIVDPDNVIQ HVSVNNLNVG RNPDEVLRIL DALQTDELCP CNRAVGGATL
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