Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1641 |
Symbol | argE |
ID | 1220476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1763076 |
End bp | 1764269 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637238030 |
Product | acetylornithine deacetylase |
Protein accession | NP_519762 |
Protein GI | 17546360 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.204001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CCGCCACCGC ACTTTCCACG CTCGACTGGA CGCGCAAGCT GGTCAGCTTC GACACCACCA GCCGCGGCTC CAACCTGGCG CTGATCGAAA CCGTGCGCGA CCACCTGCAC GGCCTGGGCC TGCAGACGCA TCTGTCGTAC AGCGACGGGC GCGACAAGGC CAACCTGTTC GCCACGGTCC CGGCGGCGGA CGGCGGCGTG CAGGGCGGTA TCGTGCTGTC GGGCCACACC GATGTGGTGC CGGTCGACGG GCAGCGCTGG AGCAGCGATC CGTTCGCGCC CGAAGTGCGC GACGGCAGGC TGTACGGGCG CGGCACGTGC GACATGAAGG GCTTCATCGC CGCGTCGCTG GCGCTGGTGC CGTCGGTGCT GCGGGCGCGC CTGCGCGAGC CGATCCACCT GGCGCTGTCA TACGACGAAG AAGTCGGCTG CATGGGCGCG CCGCGCATGA TCGAAGACCT GATCGCGCGA GGCATCCGCC CCGCCGGCTG CATCGTCGGT GAGCCGACCG GCATGCGCCC GATCGTCGCC CACAAGGGCA TCAACGCCTA CCGCTGCCGC GTGCACGGCC GCGCCGCGCA TTCGTCGCTG ACGCCGCGGG GCGTCAACGC CATAGAATAC GCCGCCCGCA TCATCTGCTT CGTGCGCGAC CTGGCCGACG AATTCCGGGC CCGGGGGCCG TTCGACGCGG CGTTCGATGT GCCGTTCACC ACCGCCTCCA CCGGGCTCAT CGACGGCGGC ATCGCGCTCA ATACCATTCC CGCGCTGTGC GAATTCGTCT TCGAGTTCCG CAGCCTGCCG GGCATCGATG CGCCGGCGAT CCGCGCGCGC GTGGAGCACT ACGTGCGCGA GACCATCGAG CCGGCCATGC GGCGCGAGCA TCCGGAGGCC CGCATCGAAC TGGACGAGAT CGCCGCCGCC CCGTCGCTGG ACGCCTCCGA ACAGGCCGCC ATCACGCAGC TCGTGCGCGC GCTGACCGCG GACAACGCCC CGCGCAAGGT CGCCTACGCC ACCGAGGCGG GCCTGTTCCA GCGCGCCGGC ATCCCGGCTG TTCTATGCGG CCCGGGCCAC ATCGAGCAGG CGCACAAGGC CGACGAATAC GTCGAACTGG CCCAGCTCGA TGCCTGCGAC CGCTTCCTGG CCAACGTGGC GCGCAGCCTG ATGCTGGAGC CCGCCTCGGC CTGA
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Protein sequence | MSTTATALST LDWTRKLVSF DTTSRGSNLA LIETVRDHLH GLGLQTHLSY SDGRDKANLF ATVPAADGGV QGGIVLSGHT DVVPVDGQRW SSDPFAPEVR DGRLYGRGTC DMKGFIAASL ALVPSVLRAR LREPIHLALS YDEEVGCMGA PRMIEDLIAR GIRPAGCIVG EPTGMRPIVA HKGINAYRCR VHGRAAHSSL TPRGVNAIEY AARIICFVRD LADEFRARGP FDAAFDVPFT TASTGLIDGG IALNTIPALC EFVFEFRSLP GIDAPAIRAR VEHYVRETIE PAMRREHPEA RIELDEIAAA PSLDASEQAA ITQLVRALTA DNAPRKVAYA TEAGLFQRAG IPAVLCGPGH IEQAHKADEY VELAQLDACD RFLANVARSL MLEPASA
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