| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1639 |
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| Symbol | metC |
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| ID | 1220474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1760865 |
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| End bp | 1762079 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238028 |
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| Product | cystathionine beta-lyase |
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| Protein accession | NP_519760 |
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| Protein GI | 17546358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.772657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.209412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG AAACCAAGCT CCCGCCCCCA TTCCCCGCCA CGCAGGCCGT CCATCCGGAC
CTGCACATCC CGCCCGGATT CGCGGCGTTC TCGCATGCCA CGCACCGTGC TTCCACGGTG
GTCTTCAAGA ACCTGGCCGA CATGCGTGCC TTCGGGCACG GCAGCGTGGT GCACTGGCGC
TACGGCCTGC ATGCCACGCC GACATCCGAC ACGCTGTGCC AGGCGCTGGC CCAGATCGAA
GGCGGCAGGC ACGCGCTGCT GCTGCCGTCG GGGCTGGGGG CGATTTCGCT GGTGTATTTC
GCGCTGGTCA AGTCGGGCGA CGACGTGCTG ATCCCGGACA ACGCCTACGG CCCGACCCGT
GACCACGGCG AATGGATGGC GCGCCAGTTC GGCATCACGG TGCGCTATTA CGATCCGATG
ATCGGTGCCG GCATCGCCGG CCTGATCCGC CATAACACGC GGCTGGTGTG GCTGGAAGCG
CCCGGCTCGG TGACGATGGA GGTGCCGGAC TGCACCGCCA TCGCCGAGGC GGCGCGCGCG
GCCGGGGCCA TCACCGCGAT CGACAACACC TGGAGCGGCG GCCTGTACTA CCAGCCGTTC
GCGCACGGCA TCGACATCTC GGTCCAGGCG CTGACCAAGT ACCAGTCGGG CGGCAGCGAC
GTGCTGATGG GGGCCACCAT CACCAACGAC GAAGCGCTGT ACCACACGCT GCTGTCCACG
CGCATGCGCA TGGGCTGGGG TGTGTCGGCG GACGACTGCT TCCTGGTGCT GCGCGGGCTG
CCCAGCCTGC CGGCCCGGCT GGCGGCGCAC GACGCCCACG CGCGCGAAGT GGCGGAATGG
CTGGCCGAGC GGCCCGAGGT GGTGCGTGTG CTGCATCCGG CGCTGCCCGA CTGTCCGGGG
CACGCGTACT GGAAGCGCGA TTTCACCGGC GCGAGCGGGT TGTTTTCGAT CGTGCTGCAC
ACGCGCTATG CGCCGGCGCA GATCGACGCC TTTGTCGAGG CGCTGCGCTA TTTCGCGATC
GGCTTTTCGT GGGGCGGGGC GAACAGCCTG GCGCTGCCGT ACAGCGTCCC GTCGATGCGC
ACCGCGACGG TCTGGCCGCC GGCGGGCTGG GAGAGCGCGG GCGGCCTGGT CCGCCTGTAC
ATCGGCCTGG AAGACCCGCG CGACCTGATC GCCGACCTGA AGAAGGCGAT GGAAGCGCAC
CTGCGGGCGG CCTGA
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| Protein sequence | MTDETKLPPP FPATQAVHPD LHIPPGFAAF SHATHRASTV VFKNLADMRA FGHGSVVHWR
YGLHATPTSD TLCQALAQIE GGRHALLLPS GLGAISLVYF ALVKSGDDVL IPDNAYGPTR
DHGEWMARQF GITVRYYDPM IGAGIAGLIR HNTRLVWLEA PGSVTMEVPD CTAIAEAARA
AGAITAIDNT WSGGLYYQPF AHGIDISVQA LTKYQSGGSD VLMGATITND EALYHTLLST
RMRMGWGVSA DDCFLVLRGL PSLPARLAAH DAHAREVAEW LAERPEVVRV LHPALPDCPG
HAYWKRDFTG ASGLFSIVLH TRYAPAQIDA FVEALRYFAI GFSWGGANSL ALPYSVPSMR
TATVWPPAGW ESAGGLVRLY IGLEDPRDLI ADLKKAMEAH LRAA
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