Gene RSc1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1634 
Symbol 
ID1220469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1755637 
End bp1756191 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content56% 
IMG OID637238023 
Producthypothetical protein 
Protein accessionNP_519755 
Protein GI17546353 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.374685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA GCAAGAAGGG CGCCGAACGG CTGATCAAGA AATATCCCAA TCGCCGGCTC 
TACGATACCC AGACCAGCAC GTACATCACG CTGGCAGACG TCAAGCAGCT CGTGATGGAA
ACCGAGGAAT TTCGCGTGGT CGACGCGAAA AGCGGTGAGG ATCTGACCCG CAGCATCCTG
CTGCAGATCA TCCTGGAAGA GGAAACCGGC GGCGTGCCGA TGTTCTCCGG CTCGATGCTG
GCGCAGATCA TCCGCTTCTA CGGTAATGCC ATGCAAGGCA TGATGGGCAC GTACCTGGAA
AAGAACATCC AGGCGTTCGT CGACATCCAG AGCAAGCTGG CCGAGAATTC GAAGGACCTC
TACAGCGGCA ACACCTTCAA CCCCGACATG TGGTCGCAGT TCATGAACAT GCAGGGGCCG
ATGATGCAGG GCATGATGAG CAACTACATC GAGCAGAGCA AGAACCTGTT CGTGCAGATG
CAGGAGCAGA TGCAGAACCA GGCCAAGAAC ATGTTCGGGA CCTTCCCGTT CAACCAGCCG
ACCGACAAGA AGTAA
 
Protein sequence
MATSKKGAER LIKKYPNRRL YDTQTSTYIT LADVKQLVME TEEFRVVDAK SGEDLTRSIL 
LQIILEEETG GVPMFSGSML AQIIRFYGNA MQGMMGTYLE KNIQAFVDIQ SKLAENSKDL
YSGNTFNPDM WSQFMNMQGP MMQGMMSNYI EQSKNLFVQM QEQMQNQAKN MFGTFPFNQP
TDKK