Gene RSc1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1633 
SymbolphbB 
ID1220468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1754514 
End bp1755254 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content64% 
IMG OID637238022 
Productacetyacetyl-CoA reductase 
Protein accessionNP_519754 
Protein GI17546352 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.495901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.389319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC GCATCGCATA CGTCACCGGC GGCATGGGCG GGATCGGTAC GGCGATTTGC 
CAGCGCTTGG CGCGCGACGA TTTCATCGTC GTCGCGGGGT GCGGCCCGAA TTCTCCGCGC
AAGGACAAAT GGCTCGAGCA GCAGCGCGAG CTGGGCTTCG ATTTCATCGC CTCGGAAGGC
AACGTCGCGG ACTGGGATTC GAGCAAGGCT GCGTTCGACA AGGTCAAGGC CGAAGTCGGC
GAGGTCGATG TGCTGATCAA CAATGCCGGC ATCACCCGCG ACGTGGTGTT CCGCAAGATG
ACCCGGTCGG ACTGGGACGC GGTGATCGGC ACCAACCTGA CGTCGCTGTT CAACGTGACC
AAGCAGGTGA TCGACGGCAT GGTCGACCGG GGCTGGGGCC GCATCGTCAA CATCTCGTCG
GTGAACGGCC AGAAGGGCCA GTTCGGCCAG ACCAACTACT CCACCGCCAA GGCCGGCCTG
CACGGCTTCA CCATGGCGCT GGCGCAGGAG GTGGCGACCA AGGGGGTGAC GGTCAACACC
GTGTCGCCGG GCTATATCGC CACCGACATG GTGAAGGCGA TCCGGCAGGA CGTGCTCGAC
AAGATCATCG GCACGATTCC GGTCAAGCGC CTGGGCGATC CGAATGAGAT CGCCTCGATC
TGCGCCTGGC TGGCTTCCGA GGAATCCGGC TTCTCGACCG GCGCGGACTT TTCGCTCAAC
GGCGGCCTGC ACATGGGCTG A
 
Protein sequence
MTKRIAYVTG GMGGIGTAIC QRLARDDFIV VAGCGPNSPR KDKWLEQQRE LGFDFIASEG 
NVADWDSSKA AFDKVKAEVG EVDVLINNAG ITRDVVFRKM TRSDWDAVIG TNLTSLFNVT
KQVIDGMVDR GWGRIVNISS VNGQKGQFGQ TNYSTAKAGL HGFTMALAQE VATKGVTVNT
VSPGYIATDM VKAIRQDVLD KIIGTIPVKR LGDPNEIASI CAWLASEESG FSTGADFSLN
GGLHMG