| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1631 |
|---|
| Symbol | phbC |
|---|
| ID | 1220466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1751336 |
|---|
| End bp | 1753132 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637238020 |
|---|
| Product | poly-beta-hydroxybutyrate polymerase transmembrane protein |
|---|
| Protein accession | NP_519752 |
|---|
| Protein GI | 17546350 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGC GTCACAAGGC ATCTTCCCAT GCAACCGGAT CCCAGGCCCA GCCAGCGTGG
CATGGCTTGG CCGATCCTGC CCAGTGGGCG GAGCAGTTCA GGCAGTGGCA GTCCATGGCG
GGGGCGTTCG CGCAGTCCGG CGCACCGGGC TCCACCGGGT TCGGACCGGC TGGCGGCATG
CCGACGGGCG AGGGCGCGAT GCCGTTTGCG CTGATCCCGC CCGAGCGGCT GGCCGAGATC
CAGCAGAAGT ACCTCGAAGC GTGGCTCCAG ATCTGGGGGC ACATGAGCGC CGGCGACAGC
GCCGAGACCG TGGCTCCCTC CGACCGCCGC TTTGCCAACG ACGCTTGGCG CAAGAGTCCG
CTGTATGGCT ATGCCGCGGC CTTCTATGTC CTCAATGCGC GCACGCTGAT GGACATGGCC
GATGCCGTGC AGGCCGATGC CAAGACGCGC GAGCGCGTGC GCTTTGCCGT GTCGCAATGG
ACCGCCGCCA TGTCGCCGTC CAACTTCCTG GCGACCAACC CCGAGGCGCA GAAGCAACTG
ATCGAGTCGC GCGGCGAGTC GCTGCGCGCC GGCATCCTCA ACATGCTGCA GGACATGGAA
CGCGGCAAGA TCTCGCAGAC GGACGAGACC GCGTTCGAGA TCGGCCGCAA CGTCGCCAAC
AGCGAAGGTG CGGTGGTCTT CGAGAACGAC TACTTCCAGC TGATCCAGTA CAAGCCGCTG
ACGGCCAAGG TGCATGCCCG CCCGCTGCTG CTGGTGCCGC CCTGTATCAA CAAGTACTAC
ATCCTGGATC TGCAGCCGGC CAACTCGCTG GTGCGCTACT CGGTGGAGCA GGGGCATACG
GTGTTCCTGG TGTCGTGGCG CAACCCGGAT GCCAGCATGG CCGCGCGCAA CTGGGATGAC
TACATCGAGG GCGGCGCGAT CGAGGCCATC CGGGTGGCCC GCGAGATTGC CGCGCAGGAC
CGGATCAACG TGCTCGGCTT CTGCGTGGGC GGCACGATCC TCTCCACGGC GTTGGCGGTG
CTGGCCGCGC GCGGCCAGCA TCCGGCGGCC AGCCTGACCC TGCTGACCAC GCTGCTGGAT
TTCAGCGACA CCGGCATCCT CGACGTGTTC GTGGACCAGG CCCAGGTGGA GATGCGCGAG
CAGACCATCG GCAGCGCGGC CCCGGCCGGC CCCGGCCTGC TGCGCGGCGT GGAGCTGGCG
AACACGTTCT CCTTCCTGCG TCCGAACGAC CTGGTGTGGA ACTACGTGGT CGAGAACTAC
CTGAAGGGCA AGACGCCCGC GCCGTTCGAC CTGCTGTACT GGAACGGCGA TTCCACCAAT
CTGCCCGGCC CGTGGTACTG CTGGTACCTG CGCCACACGT ACCTGCAGAA CGACCTGATG
GCGCCGGGCA GGCTGACGGT CTGCGGCGAG CCGGTCGATC TCGGCCGGAT CGAGGTGCCC
GTCTATCTCT ACGGTTCGCG CGAAGATCAC ATCGTCCCCT GGAAATCCGC CTATGCTTCG
ACGCAGCTGC TTAAGGGCGA GCGGCGTTTT GTGCTGGGCG CCTCGGGGCA CATCGCGGGC
GTCATCAACC CGCCGGCGGC CAATAAGCGC GCGCACTGGA TCAACGCCGG GCTACCGGAT
TCGGCCCAGG CCTGGCTGGA CGGCGCGAAG GAGCATCCGG GCAGCTGGTG GCCGGACTGG
TCCGCGTGGC TGGCCAAGCA CGCCGGGGCG CAGAAGGCCG CTCCCAAGCA CTACGGCAAT
GCGGACCATC CGGTGATCGA GCCGGCACCG GGCCGCTACG TCAAACAGAA AGCGTAA
|
|---|
| Protein sequence | MASRHKASSH ATGSQAQPAW HGLADPAQWA EQFRQWQSMA GAFAQSGAPG STGFGPAGGM
PTGEGAMPFA LIPPERLAEI QQKYLEAWLQ IWGHMSAGDS AETVAPSDRR FANDAWRKSP
LYGYAAAFYV LNARTLMDMA DAVQADAKTR ERVRFAVSQW TAAMSPSNFL ATNPEAQKQL
IESRGESLRA GILNMLQDME RGKISQTDET AFEIGRNVAN SEGAVVFEND YFQLIQYKPL
TAKVHARPLL LVPPCINKYY ILDLQPANSL VRYSVEQGHT VFLVSWRNPD ASMAARNWDD
YIEGGAIEAI RVAREIAAQD RINVLGFCVG GTILSTALAV LAARGQHPAA SLTLLTTLLD
FSDTGILDVF VDQAQVEMRE QTIGSAAPAG PGLLRGVELA NTFSFLRPND LVWNYVVENY
LKGKTPAPFD LLYWNGDSTN LPGPWYCWYL RHTYLQNDLM APGRLTVCGE PVDLGRIEVP
VYLYGSREDH IVPWKSAYAS TQLLKGERRF VLGASGHIAG VINPPAANKR AHWINAGLPD
SAQAWLDGAK EHPGSWWPDW SAWLAKHAGA QKAAPKHYGN ADHPVIEPAP GRYVKQKA
|
|---|
| |