Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1626 |
Symbol | |
ID | 1220461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1745815 |
End bp | 1747956 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238015 |
Product | ATP-dependent DNA helicase-related protein |
Protein accession | NP_519747 |
Protein GI | 17546345 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTTCGC TTTCCCCACT CGCCGAGCCG TCGGCCGATG CCGGCAATGG CGATGCCGCC GCGCTTCCCG ACGCGCCGCC CACCGACCTC CACCATGCCG AACTGGCGAC GCTGTTCGCC GATGACGGCA CGCTGGCGCA GGGCATCGAG TCGTACCGGC CGCGGACATC GCAGCTGACG ATGGCGCAGG CGGTGGCGAA TGCCATCGAG GCGGCGGATT CGCTGATCGT CGAGGCGGGT ACCGGCACGG GCAAGACCTA CGCCTACCTC GTTCCGGCGA TGCTGTGGGG CGGCAAGGTG ATCCTGTCCA CCGGGACCAA GAACCTGCAG GACCAGCTGT TCCTGCGCGA TATCCCGACC GTGCGCAAGG CCCTGAATGC ACCGGTGTCG GTGGCGCTGC TGAAGGGGCG GGCCAACTAC GTCTGCCATT ACCACCTGGA GCGCACGTCG CAGAACGGGC GGCTGTCGTC GCGGCAGGAC GCGGCGTGGC TGCGCGAGAT CAACCGCTTC CTCAAGACCA CCAAGACGGG CGACAAGGCC GAGCTTTCCG CCGTGCCCGA GAACGCGCCG GTGTGGAACC TGGTCACGTC CACGCGCGAC AACTGCCTCG GTTCGGAGTG CGCGTACTAC AAGGACTGCT TCGTCATGCG CGCCCGCAAG GAGGCGCAGC AGGCCGACAT GGTGGTCGTC AATCACCACC TGTTCTTCGC CGATGTCATG CTCAAGGACA CCGGCATGGC CGAGCTGCTG CCGGCCGCGA ACACCGTCAT CTTCGACGAA GCGCATCAGC TGCCCGAGAC CGCGACGCTG TTCTTCGGCG AGACGATCTC CACCAACCAG TTGCTGGAAC TGGCGCGGGA CAGCGTGGCC GAGGGGCTGT CGCATGCGCG CGATGCGGTG GACTGGGTGG CCATCGCCGC GCCGCTCGAG CGCGCCGCGC GCGACCTGCG CCTGGTATTC CGCCAGGACG GCGCGCGCCT GTCGATGAAG CAGATCGATA GCGATGCGGC GCTCAGCAAG CCGTTCTACG AAGTCCTGCC CAAGCTGGAG CAGGCGCTGT CCGATTTTAC CGGTGCGCTG GAGGCGCAGG CCGAGCGCGC CGAGACCATC GAGCAATGCC ATCGCCGCGC GGTGGCGCTG TGCGACAAGC TTGAGGCCTG GGCCGCCCCC AGGCCGGCGC CGGCCGCCAA GGCCGATGGC GAGGCGGCGC TCGAGGCCGA GGCACCCGTC GATGAGCGGG TGCGCTGGGT CGAAGTCTTC GCCAATGCCG TGCAGCTGCA CCTGACGCCG CTGTCGATCG CGCCGATCTT CTCGCGCCAG CGGGCCGGGC AGCCGCGCGC CTGGATCTTC ACGTCGGCGA CGCTTTCCGT GCGCGGGAAT TTCACGCACT ACGCCGCGCA GCTGGGCCTC GACCGTGACC GCTCGATGAC GCTCGACAGT CCCTTCGACT ACGCATCGCA GGGGTTGCTG TACGTGCCGC GCGATCTGCC GCAGCCGAGC GATCCGCGCT TCACCGATGC GGTGCTCGAC GCCGCCCTGC CGATGATCGA AGCGGCCGGC GGCAAGACCT TCGTGCTGTG CACCACGCTG CGCGCCGTCA ACCGCGCCGC CGAGCGGCTG ACCGACGAGT TCGCGCAGCG CGGCTGGGAT TTTCCGCTGC TGGTGCAGGG CCAGGCCAGC CGCACGGAGC TGCTCGAGCG CTTCCGCGCG CTCGGCAACG CGGTGCTGGT CGGCAGCCAG AGTTTCTGGG AAGGCGTGGA CGTGCGGGGC GAGGCGCTGT CGCTGGTCGT CATCGACAAG CTGCCGTTCG CGCCGCCCGA CGATCCGGTG CTCAGTGCCC GGATGGAAGC GCTGGAAAAG AAGGGCCTGA GCCCGTTCGC CGTCCATCAG TTGCCGCATG CCGTCATCAC GCTCAAGCAG GGTGCGGGGC GGCTGATCCG CTCCGAGAGC GATCGCGGCG TGCTGATGAT CTGCGATCCG CGCCTGGTGG AGAAGTCGTA TGGGCGGCAG ATCTGGCAGA GCCTGCCGCC GTTCAAGCGC ACCCGCGAGG CGGACACGGC GGCGGGGTTC CTGCGTTCGC TGGGTCAGGC TGAATCGGCG GCGTTTCCGG CCGACACCTC CGCGGCCGAC ACCTCCGCCT GA
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Protein sequence | MTSLSPLAEP SADAGNGDAA ALPDAPPTDL HHAELATLFA DDGTLAQGIE SYRPRTSQLT MAQAVANAIE AADSLIVEAG TGTGKTYAYL VPAMLWGGKV ILSTGTKNLQ DQLFLRDIPT VRKALNAPVS VALLKGRANY VCHYHLERTS QNGRLSSRQD AAWLREINRF LKTTKTGDKA ELSAVPENAP VWNLVTSTRD NCLGSECAYY KDCFVMRARK EAQQADMVVV NHHLFFADVM LKDTGMAELL PAANTVIFDE AHQLPETATL FFGETISTNQ LLELARDSVA EGLSHARDAV DWVAIAAPLE RAARDLRLVF RQDGARLSMK QIDSDAALSK PFYEVLPKLE QALSDFTGAL EAQAERAETI EQCHRRAVAL CDKLEAWAAP RPAPAAKADG EAALEAEAPV DERVRWVEVF ANAVQLHLTP LSIAPIFSRQ RAGQPRAWIF TSATLSVRGN FTHYAAQLGL DRDRSMTLDS PFDYASQGLL YVPRDLPQPS DPRFTDAVLD AALPMIEAAG GKTFVLCTTL RAVNRAAERL TDEFAQRGWD FPLLVQGQAS RTELLERFRA LGNAVLVGSQ SFWEGVDVRG EALSLVVIDK LPFAPPDDPV LSARMEALEK KGLSPFAVHQ LPHAVITLKQ GAGRLIRSES DRGVLMICDP RLVEKSYGRQ IWQSLPPFKR TREADTAAGF LRSLGQAESA AFPADTSAAD TSA
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