| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1623 |
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| Symbol | tex |
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| ID | 1220458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1742266 |
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| End bp | 1744605 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238012 |
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| Product | putative transcription accessory protein |
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| Protein accession | NP_519744 |
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| Protein GI | 17546342 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT CCGTGCTGCA AAAGATCGTC TCCCGCATCG CCGCCGAGCT GTCGGTGAAG
CCGCAGCAAG TCGCCGCCGC CGTGCAGCTG CTGGATGAAG GCGCCACCGT GCCGTTCATC
GCGCGCTACC GCAAGGAAGC CACCGACAAC CTGGACGATA CGCAACTGCG CAACCTGGAA
GAGCGCCTGC TGTACCTGCG CGAGCTGGAA GACCGCCGCG CGGCCATCCT GGCTTCCATC
GAGGAACAGG GCAAGCTGAC CGACCCGCTG CGCGCTGCCA TCGAGGCAGC CGAGACCAAG
CAGGTGCTGG AAGACCTCTA CCTGCCCTAC AAGCCCAAGC GCCGCACCCG CGCGCAGATC
GCCCGCGAAT GCGGCCTGGA GCCGCTGGCC CAAGCGCTGC TCGCCGATCC CACGCTCGAC
CCGCAGGCCG AGGCCGCCAA GTTCGTCAAC GGCCAGCCGA CCGCGGAAGG CGGCGTGCCC
GACGCCAAGG CCGCGCTGGA CGGCGCGCGC GACATCCTCT CCGAACAGTT CGGCGAGACC
GCGGAGCTGC TCGGCAAGGT GCGCGACCAC CTGTGGAACC AGGGCGTGAT CGCCTCCACC
GTGGTCGAGG GCAAGGAAAC CGCCGAGGAA GAGAAGTTCC GCGACTACTA CGCCTACAGC
GAGCCGATCC GCAACATGCC GTCGCACCGC GCGCTGGCGC TGTTCCGCGG CCGCAATGCG
AGCGTGCTGT TCGTCAAGCT GGGCCTGGGC GAAGAGCAGG ACGCGATGAG CCCGCATCCG
TGCGAAACCA TGATCGCGCG CCATGTCGGC ATCGAGAACA AGGGCCGCGC GGCCGACAAA
TGGCTGTCGG ACGTGTGCCG CTGGTGCTGG CGCGTCAAGG TGCAGCCGCA CATCGAGACC
GAACTGCTGA CGCAGCTGCG CGAATCCGCC GAAGCCGAGG CCATCAAGAT CTTCGGCCGC
AACCTGCACG ACCTGCTGCT GGCCGCGCCC GCCGGCCCGA AGGCGGTGAT GGGCGTCGAC
CCCGGCATCC GCACCGGCTG CAAGGTGGCC GTGGTCGACC ACACCGGCAA GCTGCTGGAA
ACCGCCACGA TCTATCCCCA CGAGCCGCGC CGCGACTGGA ACGGCTCGCT GGCCACCCTC
GCCCGCCTGG CCAAGCAGCA CGGCGTGGCG CTGGTGTCGA TCGGCAACGG CACCGCCAGC
CGCGAGACCG ACAAGCTGGT GCAGGACCTG ATGCATCACT TGGCCAAATC AGCACCCGAA
ATGAAGCTGA CCAAGATCGT GGTGAGCGAG GCCGGCGCAT CGGTATATTC GGCCTCCGAG
CTGGCGGCCA AGGAATTCCC CGACCTGGAC GTGTCGCTGC GCGGCGCGGT GTCGATCGCC
CGCCGCCTGC AGGACCCGCT GGCCGAGCTC GTGAAGATCG ACCCGAAGTC GATCGGCGTG
GGCCAATACC AGCACGACGT CAATCAGCGC GAGCTGGCCC GCGCGCTGGA CGCCGTGGTC
GAGGACTGCG TGAACGCGGT CGGCGTCGAC GTCAACACAG CCTCGACCGC GCTGCTGGCG
CGCGTGTCGG GGCTCAACGC GATCCTGGCC AAGAACATCG TCGAATACCG CGACGCCAAC
GGCGTGTTCG CCAACCGCGA AGCCCTCAGG CAGGTGCCGC GCCTGGGCGA CAAGACCTTC
GAGCAGGCCG CCGGCTTCCT GCGCATCAAC AACGGCGACA ACCCGCTCGA CCGCTCCTCG
GTGCACCCGG AAGCGTATCC GGTGGTGCAG CGCATTCTCG AGCGCATCAA GAAAGGCATC
GGCGACGTGC TCGGCAACCG CGAGGCGCTG CGCGGCCTGA CCGCGCAGGA GTTCACCGAC
GACAAGTTCG GCCTGCCGAC CGTGGTCGAC ATCCTGGGCG AACTCGAGAA GCCCGGCCGC
GATCCGCGCC CGGAATTCAA GACCGCCACC TTCCAGGACG GCGTGGAAGA CATCAAGGAC
CTGCAGCCCG GCATGGTGCT GGAAGGCGTG GTGACCAACG TGGCGGCCTT CGGCGCGTTC
ATCGACATCG GCGTGCACCA GGATGGGCTG GTGCACGTGT CGGCCCTGTC GACGAAGTTC
GTGCGTGATC CGCACGAGGT GGTCAAGCCC GGCCAGATCG TCAAGGTCAA GGTGATGGAG
GTGGACGTCA AGCGCAACCG CATCGGCCTG ACGATGCGAC TGACCGACGA GCCGGGTCAG
GTGCCCGCGC GCAGCGGCGG CGACCGCCCC GCCGGCGGCA ACCGCAACGG CGGCCAGCAG
CGCCGCGCAC CGGAACCCGC CGGCGCCATG GCCGCGGCGT TCGCCAAGCT CAAGCGCTGA
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| Protein sequence | MTDSVLQKIV SRIAAELSVK PQQVAAAVQL LDEGATVPFI ARYRKEATDN LDDTQLRNLE
ERLLYLRELE DRRAAILASI EEQGKLTDPL RAAIEAAETK QVLEDLYLPY KPKRRTRAQI
ARECGLEPLA QALLADPTLD PQAEAAKFVN GQPTAEGGVP DAKAALDGAR DILSEQFGET
AELLGKVRDH LWNQGVIAST VVEGKETAEE EKFRDYYAYS EPIRNMPSHR ALALFRGRNA
SVLFVKLGLG EEQDAMSPHP CETMIARHVG IENKGRAADK WLSDVCRWCW RVKVQPHIET
ELLTQLRESA EAEAIKIFGR NLHDLLLAAP AGPKAVMGVD PGIRTGCKVA VVDHTGKLLE
TATIYPHEPR RDWNGSLATL ARLAKQHGVA LVSIGNGTAS RETDKLVQDL MHHLAKSAPE
MKLTKIVVSE AGASVYSASE LAAKEFPDLD VSLRGAVSIA RRLQDPLAEL VKIDPKSIGV
GQYQHDVNQR ELARALDAVV EDCVNAVGVD VNTASTALLA RVSGLNAILA KNIVEYRDAN
GVFANREALR QVPRLGDKTF EQAAGFLRIN NGDNPLDRSS VHPEAYPVVQ RILERIKKGI
GDVLGNREAL RGLTAQEFTD DKFGLPTVVD ILGELEKPGR DPRPEFKTAT FQDGVEDIKD
LQPGMVLEGV VTNVAAFGAF IDIGVHQDGL VHVSALSTKF VRDPHEVVKP GQIVKVKVME
VDVKRNRIGL TMRLTDEPGQ VPARSGGDRP AGGNRNGGQQ RRAPEPAGAM AAAFAKLKR
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