Gene RSc1621 details

Gene Information

• Locus tag: RSc1621
• Symbol: kup2
• ID: 1220456
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1739587
• End bp: 1741488
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637238010
• Product: potassium uptake transmembrane protein
• Protein accession: NP_519742
• Protein GI: 17546340
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTCAAG CTCTTACAGC AACGGGATCC TCGCAATCCA ACGTGAACCT GCGCGCCATG 
GTGGTCGGCG CCGTGGGCGT GGTGTTCGGC GACATCGGCA CCAGTCCGCT GTACGCGCTC 
AAGGAGTGCT TCAGTCCCGA GCACGGCATT CCGTTTTCCA CCGCCGCGGT GCTGGGCATC 
ATCTCCATGC TGTTCTGGGC GATGGTGATC GTGGTGTCGC TCAAGTACGT GCTGTTCGTC 
ATGCGCGCCG ACAACAACGG CGAAGGCGGC ATCCTCGCGC TGATGGCGCT GTCGCTGCGC 
ACCGCGAACA AGCAGTCCAA GCGGATGGCG CTGCTGACCA TGCTGGGCGT GTTCGGCGCC 
TGCATGTTCT ACGGCGATGC CGTCATCACG CCGGCCATCT CGGTGCTTTC GGCCATGGAG 
GGCCTGGAGA TTGCCGCACC GTCGCTGTCT CCGTTCGTGC TGCCGATCAC GGTGGTGATC 
CTGGCGGCGC TGTTCCTGAT CCAGCGCGGG GGCACGTCGG TGGTGGGCAA GCTGTTCGGG 
CCCGTGATGC TGGTCTGGTT CGCCGCGCTG GCCGCGCTGG GCCTGGTCAA TCTGATGAAG 
GCGCCGCAGA TCCTGGTGGC CGTCAACCCG GTGTACGCGA TTGCGTTCCT GCATGAGCAT 
GCGCTGCAGG CGTTCGTCGT GCTGGGCTCG GTGTTCCTGG TGCTGACCGG CGCCGAGGCG 
CTGTATGCCG ACATGGGGCA CTTCGGCGCG CGGCCGATCC GCTGGGGCTG GTTCTTCATC 
GTGGCGCCGA GCCTGCTGCT GAACTATTTC GGCCAGGGAG CGATGCTGCT GACTGACCCG 
AGCACGGTCG AAAACCCGTT CTACCGCGCC GTGCCCGAAG CGCTGCAGTT GCCGATGGTG 
GTGCTGGCGG CGGCGGCCAC GGTGATCGCA TCGCAGGCGG TGATCTCCGG CGCCTTCTCG 
CTGACGAGCC AGGCCATCCA GCTGGGCTTT GTGCCGCGCA TGCGCATCCG CTATACGTCG 
GAAGCCGAGA TCGGCCAGAT TTACGTGCCG GTGGTGAACT GGATGCTGCT GATCCTGGTG 
ATCAGCGTGG TGCTGGCGTT CAAGAAGTCC GACAACCTGG CCGCCGCCTA CGGCATCGCC 
GTGACCACCA CGATGGTCAT CACGACCGTA CTGGCCGCGG TGGTGATGCG CTCGGTCTGG 
CGCTGGAATC CGGTGCTGGT GACGCTGGTG AGCCTGGGTT TCCTGGTGGT CGACATGGCG 
TTCTTCTCGG CCAACCTGCT GAAGATTCGC GACGGCGGAT GGTTCCCGCT GATGCTGGGC 
GGCGCGGTGT TCTTCCTGCT GATGACGTGG TACAAGGGCC GCCAGCTGGT GCGCGCACGC 
AGCCTGGAAG ACGGCATTCC GCTCGAACCG TTCCTCGCCG GCCTGCTGGC GCACCCGCCG 
CACCGCGTGG AGGGCACGGC TGTGTTCTTG ACGGCCAATA TCGACTTCGT GCCGGTGTCG 
CTGTTGCATA ACCTGAAGCA CAACCGCGTG CTGCACGAGC GCGTGATCTT CATCAGCTTC 
GTCACGCGCG ACATCCCCTA CGTGGACGAC AGGTGCCGCG TGACCGTGCG CGAATTCGGC 
AGCGGCATCT ACCTCGTCAA GGCGGAATAT GGGTTCAAGG AAACGCCGGA CGTCTATCGT 
GTGCTGGAGC TGGGCCAGCC GCAGATCGGC TCGCGCTGCG AGCTGATGGA TACGTCGTTC 
TTCATCGCGC GGGAATCGGT GGTGCCGTCC AAGCTGCCGG GCATGTCGAT GTGGCGCGAG 
CGGCTGTTTG CGTGGATGCA TCAGAACGGC GCCAAGCCTT CGGACTTCTT CCATATCCCC 
GCCAACCGCG TGGTGGAGCT GGGGACCAAG GTCGAGATCT GA 

 

Protein sequence

MSQALTATGS SQSNVNLRAM VVGAVGVVFG DIGTSPLYAL KECFSPEHGI PFSTAAVLGI 
ISMLFWAMVI VVSLKYVLFV MRADNNGEGG ILALMALSLR TANKQSKRMA LLTMLGVFGA 
CMFYGDAVIT PAISVLSAME GLEIAAPSLS PFVLPITVVI LAALFLIQRG GTSVVGKLFG 
PVMLVWFAAL AALGLVNLMK APQILVAVNP VYAIAFLHEH ALQAFVVLGS VFLVLTGAEA 
LYADMGHFGA RPIRWGWFFI VAPSLLLNYF GQGAMLLTDP STVENPFYRA VPEALQLPMV 
VLAAAATVIA SQAVISGAFS LTSQAIQLGF VPRMRIRYTS EAEIGQIYVP VVNWMLLILV 
ISVVLAFKKS DNLAAAYGIA VTTTMVITTV LAAVVMRSVW RWNPVLVTLV SLGFLVVDMA 
FFSANLLKIR DGGWFPLMLG GAVFFLLMTW YKGRQLVRAR SLEDGIPLEP FLAGLLAHPP 
HRVEGTAVFL TANIDFVPVS LLHNLKHNRV LHERVIFISF VTRDIPYVDD RCRVTVREFG 
SGIYLVKAEY GFKETPDVYR VLELGQPQIG SRCELMDTSF FIARESVVPS KLPGMSMWRE 
RLFAWMHQNG AKPSDFFHIP ANRVVELGTK VEI