| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1619 |
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| Symbol | pyrD |
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| ID | 1220454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1737914 |
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| End bp | 1738948 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637238008 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | NP_519740 |
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| Protein GI | 17546338 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAACG CCCTGTATCC GCTTGCTCGC CCGCTGCTGT TTTCGATGGA CCCCGAAGAC
GCGCACCACT TCACGCTGAA CCAGCTCAAG CGCGCGCATG CGCTGGGGCT GTCGGGCTGC
ATCGGCGCGC GCGTGGCGCC GCAGCCCCGC ACGGTGATGG GCATCGCGTT CCCGAACCCG
GTCGGGCTGG CGGCGGGCCT GGACAAGGAC GGCGCCTACA TCGATGCGCT GGGCGCGCTC
GGCTTCGGCT TCATCGAAGT GGGCACCGTG ACGCCGCGCG CGCAGCCGGG CAATCCGCGG
CCGCGCATGT TCCGGCTGCC GGCGGCGAGT GCGCTGATCA ATCGCATGGG CTTCAACAAC
GGCGGCGTCG ATGCGTTCAT CCGCAATGTG CAGGCGTCGA AGTGGCGCGA GGCGGGCGGC
GTGCTGGGCC TGAACATCGG CAAGAACGCC GACACGCCGA TCGAGCGCGC CGTCGACGAC
TACCTGCACT GTCTGGAGCG TGTCTACCCG TACGCCAGCT ATGTGACGGT CAATATCTCG
TCGCCGAACA CCAAGAACCT GCGCCAGCTG CAAGGCGCGA GCGAACTGGA TAGCCTGCTC
GGCACGCTGC GCGGGGCGCA GCAGCGCTTG GCCGACCAGC ACAAGCGCTA CGTGCCGGTG
GTGCTGAAGA TCGCGCCGGA CCTGGACGAT GACCAGATCG CCAACATTGG CGACGCATTG
CTGCGCCATC GGATGGACGG CGTGATCGCC ACCAACACCA CGATCCGCCG CGAAGCCGTG
GCCGGCCTGC CGCATGCGGA GGAGGCGGGC GGGCTGTCGG GGCAGCCCGT GCGGGAGGGC
TCGACGCGCG TCATCCGCGC GCTGTGCGGC CTGCTGGGCG ATGCGGTGCC CATTATCGGC
GTGGGCGGCA TCCTGGCCGG GGAGCATGCC CGGGAGAAGA TCGACGCCGG CGCGCAGCTG
GTGCAGCTCT ACACGGGGCT GATCTACCGC GGCCCGGGCC TGGTGGCCGA GTGCGCGCGC
GCCCTGGCAC GCTGA
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| Protein sequence | MLNALYPLAR PLLFSMDPED AHHFTLNQLK RAHALGLSGC IGARVAPQPR TVMGIAFPNP
VGLAAGLDKD GAYIDALGAL GFGFIEVGTV TPRAQPGNPR PRMFRLPAAS ALINRMGFNN
GGVDAFIRNV QASKWREAGG VLGLNIGKNA DTPIERAVDD YLHCLERVYP YASYVTVNIS
SPNTKNLRQL QGASELDSLL GTLRGAQQRL ADQHKRYVPV VLKIAPDLDD DQIANIGDAL
LRHRMDGVIA TNTTIRREAV AGLPHAEEAG GLSGQPVREG STRVIRALCG LLGDAVPIIG
VGGILAGEHA REKIDAGAQL VQLYTGLIYR GPGLVAECAR ALAR
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