Gene RSc1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1617 
Symbolaat 
ID1220450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1735939 
End bp1736685 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID637238004 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionNP_519738 
Protein GI17546336 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCT GGTTGGATCC GCACGATCCC TTCCCGCCCG TCGATCGCGC GCTCGGCCCC 
GACTCGGAAG CGCCGGGCCT GCTGGCCGCG AGCGCGGACC TATCGCCGCA GCGGCTCCTG
ATCGCGTACC GGCAAGGCAT CTTTCCGTGG TACGCCCAGG GCCAGCCGGT GCTGTGGTGG
AGCACTGACC CACGCATGGT GCTGCGGCCC GAGGACTTCC GAGTCTCGAC CACGTTCCGC
AAGACGCTGC GGCGCGTGCT CGACGACCCG ACCTGGGAGA TCCGCATCGA TCACGCCTTT
CGCGACGTGA TGGTCGACTG CGCCACCACC GCCCGCCCCG GCCAGCACGG CACCTGGATC
ACCGAAGACG TCATCCAGGC CTATACCGCC CTGCACCGCC GCGGTTACGC GCACAGCGTG
GAAACCTGGC ATGGGGGCCG GCGCGTCGGC GGCCTGTACG GCGTTGCGCT GGGCCACATG
TTCTACGGCG AATCGATGTT CGCGCACCGC ACCGATGCCT CGAAGATCGC GCTGGCAGCG
CTGTGCGCCT TCCTCGGCAG CCGGGGCGTC GCGATGATAG ACTGCCAGCA GGAAACCGAG
CACCTGGCTT CGCTGGGCGG TGCGCCGGTG CCGCGCGCGG CGTTTCTCGC CCACGTGCGC
GAAGCGGCCA GCGCACCGGC CATCGTGCCA TGGCACTTCG ACAAATCCGT GCTTCGCCGG
TGGACCGCCC GCAATGAGCA AGCTTAA
 
Protein sequence
MIAWLDPHDP FPPVDRALGP DSEAPGLLAA SADLSPQRLL IAYRQGIFPW YAQGQPVLWW 
STDPRMVLRP EDFRVSTTFR KTLRRVLDDP TWEIRIDHAF RDVMVDCATT ARPGQHGTWI
TEDVIQAYTA LHRRGYAHSV ETWHGGRRVG GLYGVALGHM FYGESMFAHR TDASKIALAA
LCAFLGSRGV AMIDCQQETE HLASLGGAPV PRAAFLAHVR EAASAPAIVP WHFDKSVLRR
WTARNEQA