| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1607 |
|---|
| Symbol | |
|---|
| ID | 1220440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1727282 |
|---|
| End bp | 1728205 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637237994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519728 |
|---|
| Protein GI | 17546326 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00020661 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAG CGTATTCGGC CGCACGCATG CCGGCCCTTG ATTCCCTGTT CGTGGCTGCC
ATGCCGTGGT TGTTCGTGCT GATCTGGAGC ACGGGTTTTG TCGTGGCCAA GTTCGGCATG
CCGTATGCGG AGCCGATCAC CTTCCTGTTC CTGCGCTTCG TTGGCGTGCT GGTGTGCCTG
CTGCCGCTGG TGTGGGTCGC GCGCGTGCCG CTGCCGCGTC GCGCCGGCGC GGACGCGGAC
GCGGTCGACT GGCGGACCAT CGGCCACCTG GCCGTGGCGG GCGTGCTGAT GCAATGGGGC
TACCTCGGCG GCGTGTGGGA GGCGATCAAG CTCGGCATGC CGGCCGGCAT GAGCGCGCTG
ATCGTCGGCA TGCAGCCGAT CCTGACCGCG CTCTACGTCT CGATGCGCGG CGAGCGCGTG
TCACCGCGCC AATGGCTGGG CTTGCTGTTC GGCATCGCCG GGGTCGGGCT GGTGGTGGCC
AACAAGCTGC ACCTGGCGGG CGTCAACGTG ACGACGCTGG GCTTCTGCGT GGGGGCGCTG
CTGTCGATCA CGGCCGGTAC GCTGTACCAG AAGCGCTTCT GCCCGGTGTT CGACCTGCGG
ATGGGTGCAT GCATCCAGTT CGGCGCGTCG GCGCTGCTGT GCTTGCCGTT CATGTTCGCC
TTCGAGACGC GCGCGGTGCA GTGGACCGGC CCGATGATCG GTGCGCTGGT TTGGTCGGTG
CTGGCTTTGT CGATCGGCGC GATCTCGTTG CTGTTCATGC TGATCCGCCA GGGGGCCGCG
ACCAAGGTGA CTTCGCTGCT GTACCTGACG CCGCCCACGA CCGCCGCGAT GGCCTGGGCG
CTGTTCGGTG AGCGCTTTCC GCCGCTGGCG GCGCTGGGCA TGGTGATCGC CGCATGCGGC
GTGGCGCTGG TCATCCGCAG ATGA
|
|---|
| Protein sequence | MTQAYSAARM PALDSLFVAA MPWLFVLIWS TGFVVAKFGM PYAEPITFLF LRFVGVLVCL
LPLVWVARVP LPRRAGADAD AVDWRTIGHL AVAGVLMQWG YLGGVWEAIK LGMPAGMSAL
IVGMQPILTA LYVSMRGERV SPRQWLGLLF GIAGVGLVVA NKLHLAGVNV TTLGFCVGAL
LSITAGTLYQ KRFCPVFDLR MGACIQFGAS ALLCLPFMFA FETRAVQWTG PMIGALVWSV
LALSIGAISL LFMLIRQGAA TKVTSLLYLT PPTTAAMAWA LFGERFPPLA ALGMVIAACG
VALVIRR
|
|---|
| |