Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1600 |
Symbol | aceE |
ID | 1220433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1717310 |
End bp | 1720000 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237987 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | NP_519721 |
Protein GI | 17546319 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.160826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.690435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCG TACCAGAGCA AGTCCTGGGC GCCACGCGCG CCAGCGACGT CGATCCCCAG GAAACCAAGG AATGGCTGGA GGCGCTGCAG GGCGTCATCG GCGCGGAAGG CCCGGACCGT GCAGCGTTCC TGCTCGACAA GCAGCTCGAG TACGCGCGCA TCAACGGCGT GACCTCGCCG CTGCATGCGG AAACCCCCTA TATCAATACG ATCCCGGTCG AGAACCAGGA GCGCATTCCC GGCGACCAGG AAATCGAGCA CCGCATCCGC TCGTTCACGC GCTGGAACGC CATGGCGATG GTCCTGCGCG CCAACAAGGA CACCAACGTC GGCGGCCACA TCTCGTCGTT CGCCTCGGCC GCCACGCTGT ATGACGTCGG CTACAACCAT TTCTGGCATG CCCCGTCGGA CAAGCATGGC GGCGACATGG TCTTCGTGCA GGGTCACTCG GCACCGGGCG TGTATTCGCG CGCGTTCCTG CTGGGCCGCC TGTCCGAAGA TCAGCTCGAC AGCTTCCGCC AGGAAGTGGA CGGCAAGGGC ATCTCGTCGT ATCCGCACCC GTGGCTGATG CCGGATTTCT GGCAGTTCCC GACCGTGTCG ATGGGCCTGG GCCCGATCAT GGCGATCTAC CAGGCGCGCT TCACCAAGTA CCTGGCCAGC CGCAGCCTGA TCCAGAACTT CGAGAACCGC AAGGTCTGGG CCTTCCTGGG CGACGGCGAG ACCGACGAGC CGGAATCGCT GGGCGCGATC GGCATGGCCG GCCGCGAGAA GCTGGACAAC CTGGTCTTCG TGATCAACTG CAACCTGCAG CGCCTGGACG GCCCGGTGCG CGGCAACGGC AAGATCATCC AGGAGCTGGA GAGCGAATTC CGCGGCGCCG GCTGGAACGT CATCAAGGTC ATCTGGGGCA GCCGCTGGGA TCAACTGCTC GCCCGCGACA CCAAGGGCCT GCTGATGAGC CGCATGATGG AATGCGTCGA CGGCGAGTAC CAGACCTTCA AGTCGAAGAG CGGCGCCTAT GTGCGTGAGT TCTTCTTCAA CACGCCGGAA CTCAAGGCCA TGGTGGCCGA CTGGTCCGAC GACGACATCT GGGCGCTGAA CCGCGGTGGT CATGACCCGC ACAAGATCTT CGCCGCCTTC AAGTCGGCCA CCGAGCACAA GGGCCAGCCG ACCGTCATCC TCGCTAAGAC CATCAAGGGC TATGGCATGG GCGAGGCCGG CGAAGCGATG AACATCGCCC ACCAGCAGAA GAAGATGCCG GTGGACGCCA TCCGCAAGCT GCGCGACCGC TTCAACATTC CGGTTGCCGA CGATCAGCTC GAGCACGTTC CGTACGTCAA GTTCGAAGAA GGCTCGAAGG AACTGGAATA CATGCGCCGC GCGCGCATGG ACCTGGGCGG CTACCTGCCG GCCCGCCGCC AGAAGGCCGA CGCGCTGCAA GTGCCGGCGC TGGCTGCGTT CGACGCGCTG CTCAAGGCCA CTGGTGAAGG CCGCGAAGTG TCCACCACGA TGGCCTTCGT GCGCATTTTG AACATCCTGC TGAAGGACAA GAACGTCGGC AAGCACGTCG TGCCCATCGT CCCGGATGAG TCGCGCACGT TCGGCATGGA AGGTCTGTTC CGCCAGGTCG GCATCTGGAA CCAGGAAGGC CAGAAGTACG TGCCGCAGGA CCACGACCAG CTGATGTTCT ACAAGGAATC GCAGACGGGT CAGGTGCTGC AGGAGGGCAT CAACGAAGCC GGCGCCATGT GCGACTGGAT CGCCGCCGCA ACGTCGTACT CGACGCACGG CGTGGCGATG ATCCCGTTCT ACATCTACTA CTCGATGTTC GGCATCCAGC GCATCGGCGA CCTCTGCTGG GCCGCCGGCG ACATGCGCTC GCGCGGCTTC CTGCTGGGCG GCACCGCAGG CCGCACCACG CTGAACGGCG AGGGTTTGCA GCACGAAGAC GGCCACTCGC ACGTCTACCA CGCCGCCATC CCGAACTGCA TCTCGTATGA CCCGACCTTC CAGTATGAAC TGGCGGTCGT GATGCAGGAC GGCCTGCGCC GGATGTACGT CGAGCAGGAA GACGTCTATT ACTACCTGAC GGTGATGAAC GAGAACTACG AGCACCCCGA AATGCCGGCG GGTGCCGAGG CCGACATCAT CAAGGGCATG TACCTGTTCA AGAAGGGCGT CGAGAACAGC AACGCGCCGC GCGTGCAACT GCTGGGCTCG GGCACGATCT TCCGCGAGGT GATCGCCGCG GCCGAGCTGC TCAAGAAGGA CTGGGGCGTC GAGTCCGATC TGTGGGGCTG CCCGAGCTTC ACCGAGCTGG CCCGCGAAGG CAATGCCGCA GCGCGCTGGA ACCTGCTGCA CCCGACCGAC GCGCCGCGCG AATCGCACGT CGAGAAGATG CTCAAGGGCG TGCGCGGCCC GGTCATTGCT TCGACCGACT ACGTCCGCAC CTTCGCCGAG CAGATCCGCG CCTTCGTGCC GCGCCGCTAC GTGGTGCTGG GCACCGACGG CTTCGGCCGC TCGGACACCC GCGAAAAGCT GCGCCACTTC TTCGAGGTGG ATCGCTACTG GGTGACGGTC GCGTCGCTCA AGGCGCTCGC CGACGAAGGC GTGCTGCCGC GCGAAAAGGT GGCCGAGGCG CTCAAGAAGT ACAACCTCGA TCCCAACAAG CCCAACCCGA TGACCGTATA A
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Protein sequence | MSAVPEQVLG ATRASDVDPQ ETKEWLEALQ GVIGAEGPDR AAFLLDKQLE YARINGVTSP LHAETPYINT IPVENQERIP GDQEIEHRIR SFTRWNAMAM VLRANKDTNV GGHISSFASA ATLYDVGYNH FWHAPSDKHG GDMVFVQGHS APGVYSRAFL LGRLSEDQLD SFRQEVDGKG ISSYPHPWLM PDFWQFPTVS MGLGPIMAIY QARFTKYLAS RSLIQNFENR KVWAFLGDGE TDEPESLGAI GMAGREKLDN LVFVINCNLQ RLDGPVRGNG KIIQELESEF RGAGWNVIKV IWGSRWDQLL ARDTKGLLMS RMMECVDGEY QTFKSKSGAY VREFFFNTPE LKAMVADWSD DDIWALNRGG HDPHKIFAAF KSATEHKGQP TVILAKTIKG YGMGEAGEAM NIAHQQKKMP VDAIRKLRDR FNIPVADDQL EHVPYVKFEE GSKELEYMRR ARMDLGGYLP ARRQKADALQ VPALAAFDAL LKATGEGREV STTMAFVRIL NILLKDKNVG KHVVPIVPDE SRTFGMEGLF RQVGIWNQEG QKYVPQDHDQ LMFYKESQTG QVLQEGINEA GAMCDWIAAA TSYSTHGVAM IPFYIYYSMF GIQRIGDLCW AAGDMRSRGF LLGGTAGRTT LNGEGLQHED GHSHVYHAAI PNCISYDPTF QYELAVVMQD GLRRMYVEQE DVYYYLTVMN ENYEHPEMPA GAEADIIKGM YLFKKGVENS NAPRVQLLGS GTIFREVIAA AELLKKDWGV ESDLWGCPSF TELAREGNAA ARWNLLHPTD APRESHVEKM LKGVRGPVIA STDYVRTFAE QIRAFVPRRY VVLGTDGFGR SDTREKLRHF FEVDRYWVTV ASLKALADEG VLPREKVAEA LKKYNLDPNK PNPMTV
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