| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1587 |
|---|
| Symbol | dinP |
|---|
| ID | 1220420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1702478 |
|---|
| End bp | 1703566 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637237974 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | NP_519708 |
|---|
| Protein GI | 17546306 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.937216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGC CTGCCGTGCG AAAGATCATC CATTGCGACT GTGACTGCTT CTACGCGGCC
ATCGAGATGC GCGACGATCC GCGACTCGTG GGGAGGCCGC TGGCCGTGGG CGGGCGCCCC
GAGCGGCGCG GCGTGGTCGC CACCTGTAAT TACGAGGCGC GCAAGTTCGG CATCCACTCG
GCGATGCCGA TGGCGCAGGC GGTCAAGCGC TGTCCCGACC TGCTGATCGT GCCGCCCGCG
ATGGACAAGT ACCGCCAGGT CGCCCGGCAG ATCTTCGCCA TCTACCAGGG CTACACGCCG
CTGGTGGAGC CGCTGTCGCT CGACGAGGCC TACCTGGACG TGACCGACAG CCCGATGCTG
GCCGGCAGCG GCACGCGCAT CGCCGAGGAC ATCCGCCGTC GCGTGCGCGA GGAGATCGGC
ATCACGGTGT CGGCGGGCGT GGCGCCCAAC AAGTTCATCG CCAAGATCGC CAGCGACTGG
AACAAGCCCG ACGGCCTGTT CGTGGTCCGG CCGGAGCAGG TGGATGCCTT CGTGGCGGCC
CTGCCGGTCG AGCGCCTGTT CGGCGTGGGC AAGGTGACGG CCGCCAAGCT GCGGCGCCTG
GGCGCGCAGA CCTGCGGCGA CCTGCGCGGC TGGGGCGCCG ACCGGCTGCA GCAGCATTTC
GGCAGCTTCG GCTTCCGGCT GCATGACCTG TGCCGGGGGA TCGATCACCG GCAGGTGCAG
CCGTCGCAGA TCCGCAAGTC GGTGAGCGTG GAGGAAACCT ATGCGACGGA CCTGCGCACG
CTGGACGACT GCCAGCGCGA ACTGACCATC CTGGTCGATC AGCTCGCCGC GCGCGTGGAG
CGGGCCCGTG CCGGCGACAT GATCCACAAG ACCTTCGTCA AGCTGCGCTT TGCGGATTTC
CGCGGTACCA CGGTGGAGTG CGTTTATCCG CAGGTGGCGC TGCCGGTCTT CAACCGGCTG
CTGGCACAGG GTTTCGAGCG GCGGCGCATG CCGGTGCGGT TGCTCGGCGT GGGCGTGCGC
CTGCATGAGA CGGATGCCCA TGCGCGCCAG CAGGCGCTGT TTGCCGAGGG CCCGCCGCCC
GGCGCCTGA
|
|---|
| Protein sequence | MRRPAVRKII HCDCDCFYAA IEMRDDPRLV GRPLAVGGRP ERRGVVATCN YEARKFGIHS
AMPMAQAVKR CPDLLIVPPA MDKYRQVARQ IFAIYQGYTP LVEPLSLDEA YLDVTDSPML
AGSGTRIAED IRRRVREEIG ITVSAGVAPN KFIAKIASDW NKPDGLFVVR PEQVDAFVAA
LPVERLFGVG KVTAAKLRRL GAQTCGDLRG WGADRLQQHF GSFGFRLHDL CRGIDHRQVQ
PSQIRKSVSV EETYATDLRT LDDCQRELTI LVDQLAARVE RARAGDMIHK TFVKLRFADF
RGTTVECVYP QVALPVFNRL LAQGFERRRM PVRLLGVGVR LHETDAHARQ QALFAEGPPP
GA
|
|---|
| |