Gene RSc1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1583 
SymbolihfA 
ID1220415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1699590 
End bp1699904 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content65% 
IMG OID637237969 
Productintegration host factor subunit alpha 
Protein accessionNP_519704 
Protein GI17546302 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACGC TGACCAAGGC CGAGCTCGCC GAGATGCTGT TCGAGCAGGT CGGCCTGAAC 
AAGCGTGAGT CGAAGGACAT GGTCGAAGCT TTTTTCGACG TGATTCGCGA GGCGCTCGAA
CAGGGCGACA GCGTCAAGCT GTCCGGCTTC GGCAACTTCC AGCTGCGCGA CAAGCCGCAG
CGTCCGGGGC GCAATCCGAA GACCGGCGAG ATCATTCCCA TCACGGCGCG CCGTGTCGTC
ACCTTCCACG CGAGCCAGAA GCTCAAGGCG CTCGTCGAGG AGCGCGTCGA GCCGATGCCC
GCCAGCGCTG CGTAA
 
Protein sequence
MPTLTKAELA EMLFEQVGLN KRESKDMVEA FFDVIREALE QGDSVKLSGF GNFQLRDKPQ 
RPGRNPKTGE IIPITARRVV TFHASQKLKA LVEERVEPMP ASAA