Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1583 |
Symbol | ihfA |
ID | 1220415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1699590 |
End bp | 1699904 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237969 |
Product | integration host factor subunit alpha |
Protein accession | NP_519704 |
Protein GI | 17546302 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACGC TGACCAAGGC CGAGCTCGCC GAGATGCTGT TCGAGCAGGT CGGCCTGAAC AAGCGTGAGT CGAAGGACAT GGTCGAAGCT TTTTTCGACG TGATTCGCGA GGCGCTCGAA CAGGGCGACA GCGTCAAGCT GTCCGGCTTC GGCAACTTCC AGCTGCGCGA CAAGCCGCAG CGTCCGGGGC GCAATCCGAA GACCGGCGAG ATCATTCCCA TCACGGCGCG CCGTGTCGTC ACCTTCCACG CGAGCCAGAA GCTCAAGGCG CTCGTCGAGG AGCGCGTCGA GCCGATGCCC GCCAGCGCTG CGTAA
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Protein sequence | MPTLTKAELA EMLFEQVGLN KRESKDMVEA FFDVIREALE QGDSVKLSGF GNFQLRDKPQ RPGRNPKTGE IIPITARRVV TFHASQKLKA LVEERVEPMP ASAA
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