Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1578 |
Symbol | infC |
ID | 1220410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1694462 |
End bp | 1694998 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637237964 |
Product | translation initiation factor IF-3 |
Protein accession | NP_519699 |
Protein GI | 17546297 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGGACAT TCAACATCGC TACTGAGAAA TCTCACCGCA TCAACCGCGA GATCACCGCG CCGGAAATCC GGCTGACCGG GGTTGAAGGG GAACAGCTCG GCATCGTCAA ACTGTTCGAC GCACTGCGTC TGGCAGAAGA GAAGGACGTC GACCTGGTCG AGATCGCGCC GACCGCGCAG CCGCCTGTCT GCCGCCTGAT GGACTATGGC AAGTTCAAGT ATCAGGAACA GAAGAAGGCC CACGAGGCCA AGCTGAAGCA GAAGGTCATC CAGGTGAAGG AAGTGAAATT CCGCCCTGGT ACCGACGACG GCGACTACGA GGTCAAGCTG CGCAATCTCA AGCGCTTCCT GGATGAAGGT GATCGCACCA AGATCACGCT GCGCTTCCGG GGCCGCGAGA TGGCGCACCA GGAAATCGGC GCACGCATGC TCGATCGTCT GAAGACGGAC TTGGAAGAGT TCGGCCAAGT CGAGCAGATG CCGAAGATGG AAGGTCGCCA GATGGTGATG ATGTTGGCGC CGAAGAAGCG CAAGTGA
|
Protein sequence | MRTFNIATEK SHRINREITA PEIRLTGVEG EQLGIVKLFD ALRLAEEKDV DLVEIAPTAQ PPVCRLMDYG KFKYQEQKKA HEAKLKQKVI QVKEVKFRPG TDDGDYEVKL RNLKRFLDEG DRTKITLRFR GREMAHQEIG ARMLDRLKTD LEEFGQVEQM PKMEGRQMVM MLAPKKRK
|
| |