Gene RSc1577 details

Gene Information

• Locus tag: RSc1577
• Symbol: thrS
• ID: 1220409
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1692527
• End bp: 1694434
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637237963
• Product: threonyl-tRNA synthetase
• Protein accession: NP_519698
• Protein GI: 17546296
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.704052
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGCGA TTACGTTGCC GGACGGTTCC CGGCGCGAGT TTCCCGGCCC GGTGACGGTG 
GCCGAAGTGG CGCAGAGCAT CGGCGCGGGC TTGGCCAAGG CCGCGCTGGC CGGCCGCATT 
GACGGGCAAC TGGTCGACAC GAGCTTCAGG ATCGAGCAGA ACGTCGACCT GGCCATCGTC 
ACGGACAAGG ATACGGACGG CCTCGACGTG ATTCGCCACT CGACGGCGCA CTTGCTGGCC 
TATGCCGTCA AGGAGCTGTA CCCGGAAGCC CAGGTCACGA TCGGCCCGGT CATCGAAAAC 
GGGTTCTACT ACGACTTCGC CTACAAGCGT CCCTTTACGC CGGAAGACCT CGTCGCCATC 
GAGAAACGGA TGGCCGAACT GGCCAAAAAG GACGAAAAGG TCACGCGCGA AGTCTGGAGC 
CGCGACGACG CCGTCAAGCT GTTCGAGGGC ATGGGCGAGA AGTACAAGGC GGAGATCATC 
GCCTCGATTC CGGAAGACCA GGAAATCGGC CTGTACCGCG AAGGCAATTT CGTCGACCTG 
TGCCGTGGCC CGCACGTGCC GTCCACGGGC AAGCTCAAGG TCTTCAAGCT GATGAAGGTG 
GCCGGCGCCT ACTGGCGCGG CGACTCCAAC AACGAGATGC TCCAGCGCAT CTACGGCACG 
GCCTGGGCCA AGAAGGAAGA CCAGGAGGCC TACCTGCACA TGCTGGAAGA GGCCGAGAAG 
CGCGACCACC GCAAGCTCGG CAAGTTGCTC GACCTGTTCC ACCTGCAGGA AGAAGCGCCC 
GGCATGGTGT TCTGGCACCC GAAGGGCTGG CAGATCTGGC AGGCCGTCGA GCAATACATG 
CGCGGCCGCC TGGCCGGCGC CGGCTACAGC GAAGTCCGCA CGCCGCAAGT GATGGATCGC 
GGCCTGTGGG AGCGCTCCGG CCACTGGGAG AACTACAAAG AGAACATGTT CGTGACGGAA 
TCGGAAAAGC GCGAATACGC GATCAAGCCG ATGAACTGTC CCGGCCATGT GCAGATTTTC 
AACCACGGCC TGCGCTCGTA TCGCGACCTG CCGCTGCGCC TGGCCGAGTT CGGCGCGTGC 
CATCGCAATG AGCCGTCCGG CGCGCTGCAT GGCCTGATGC GCGTGCGCGG GTTTGTGCAG 
GATGATGCGC ACATCTTCTG CACGGAAGGC CAGATCATGG CCGAGGCCAA GGACTTCAAC 
GACCTGGCCT TCAGCATCTA CGAGGACTTC GGCTTCGAGA ACGTCGCCGT CAAGCTGGCG 
CTGCGTCCGG ACAAGCGGGC CGGCACGGAC GAAATCTGGG ATCACGCCGA GGAAGGCCTG 
CGCACGGCGC TGCGCGCCTG CGGCGTCGAA TGGGAAGAGT TGCCGGGCGA GGGCGCTTTC 
TACGGCCCGA AGGTCGAGTA CCACATCAAG GACGCCATCG GCCGTTCGTG GCAGTGCGGC 
ACGCTGCAGC TCGACCTGGT GCTGCCCGAG CGACTGGGTG CCGAGTATGT CGCGGAAGAC 
AACAGCCGCA AGCGCCCGGT CATGCTCCAC CGCGCCATCC TGGGCTCGTT CGAGCGCTTC 
CTGGGCATTT TGCTGGAAAA CCATGCCGGC GCGCTGCCGC TGTGGCTGGC GCCGGAGCAG 
GTGGTGATCA TGAGCATCGC CGATGCCCAC GCCGAATATG CGGAATCCGT TGCGCAATCC 
CTGCAAAAAC AAGGGTTTAG GGCGTCCGCC GATTTGCGGA ACGAGAAAAT TACGTATAAA 
ATCCGCGAGC ACTCCTTGCA GAAGGTCCCC TACCTCGTTG TGGTGGGCGA CAAGGAGCGC 
GACGGAAATC AGGTGGCCGT GCGTGCCCGT GGCAACGTCG ATCTCGGTTC GATGCCGGTA 
TCCACGTTCG TTGAGCGACT GCAGAACGAT TTCGCCAACA AGTCATGA 

 

Protein sequence

MIAITLPDGS RREFPGPVTV AEVAQSIGAG LAKAALAGRI DGQLVDTSFR IEQNVDLAIV 
TDKDTDGLDV IRHSTAHLLA YAVKELYPEA QVTIGPVIEN GFYYDFAYKR PFTPEDLVAI 
EKRMAELAKK DEKVTREVWS RDDAVKLFEG MGEKYKAEII ASIPEDQEIG LYREGNFVDL 
CRGPHVPSTG KLKVFKLMKV AGAYWRGDSN NEMLQRIYGT AWAKKEDQEA YLHMLEEAEK 
RDHRKLGKLL DLFHLQEEAP GMVFWHPKGW QIWQAVEQYM RGRLAGAGYS EVRTPQVMDR 
GLWERSGHWE NYKENMFVTE SEKREYAIKP MNCPGHVQIF NHGLRSYRDL PLRLAEFGAC 
HRNEPSGALH GLMRVRGFVQ DDAHIFCTEG QIMAEAKDFN DLAFSIYEDF GFENVAVKLA 
LRPDKRAGTD EIWDHAEEGL RTALRACGVE WEELPGEGAF YGPKVEYHIK DAIGRSWQCG 
TLQLDLVLPE RLGAEYVAED NSRKRPVMLH RAILGSFERF LGILLENHAG ALPLWLAPEQ 
VVIMSIADAH AEYAESVAQS LQKQGFRASA DLRNEKITYK IREHSLQKVP YLVVVGDKER 
DGNQVAVRAR GNVDLGSMPV STFVERLQND FANKS