| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1576 |
|---|
| Symbol | relA |
|---|
| ID | 1220407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1689822 |
|---|
| End bp | 1692062 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637237961 |
|---|
| Product | GTP pyrophosphokinase |
|---|
| Protein accession | NP_519697 |
|---|
| Protein GI | 17546295 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA AGACCGACCG TCCGGCAGAG GGCGCCGGCG CGACGGCCGA CAGGGCGGCG
CGCGAGGCGG CCGTCGCGCG CGCGCTCGAA TGCCTGGCCG ACCATGCCGG CGACCACCAG
ACGCTGACCG GCGAGCCGCT GGTGTCGCAC GCGCGCGGCA CGGTGGCGAT CCTCGAGGGG
CTGCGCGTCG ACGCGCCGTC GTTGCAGGCG GCGGCGCTGT TCCTGCTGCC GATCCTGGCC
ACCGACAACG AGAAGGCGAT CGAGCCGGCG TTCGGCGGCG AGGTGGCCCG GCTGGTGCAC
GACGTGCGGC AGCTGCTGCG CATCGGCGCG ATCGCCGGCA TGGCCAGCCC GGCCGAGGCG
GGCGTCACCC GCAAGAACGA AGCCGAGGCG CGCCGCGCCC AGGTCGAGGC GCTGCGCAAG
ATGCTGCTGG CCTTCGCGCA GGACATCCGC GTGGTGCTGA TCCGCCTGGC GTCGCGGCTG
CAGTCGCTGC GCTGGCTGGC CCAGAACAAG CTGCCCGCCC CTGAGGGCAT GGCGCGCGAG
ACGCTCGACA TCTACGCGCC GCTCGCCAAC CGGCTCGGCA TCTGGCAGCT GAAGTGGGAG
CTCGAAGACC TGGGCTTCCG CTTCGAAGAC CCCGATACCT ACAAGCGCAT CGCGCGCCTG
CTGGACGAAA AGCGCATCGA GCGCGAGCAG TTCATCGGCG AGGCGATCGC CAGGCTGCAG
CAGACACTGC GCGACGCGGG CATCCACGCC GAGGTCAGCG GCCGCCCCAA GCACATCTAC
AGCATCTGGC GGAAGATGCG CGGCAAGGAC CTCGACTTCG CCGATCTGTA CGATGTGCGC
GCCTTCCGCG TCATCGTCGA CGACATCAAG GACTGCTACA CCGTGCTCGG CTTCGTGCAC
CACATGTGGC AGCCGATCCC GAAGGAGTTC GACGACTACA TCTCGCGTCC CAAGACCAAT
GGCTACAAGT CGCTGCACAC GGTGGTGATC GGTGACGACG GCCGCGCGCT GGAGGTGCAG
ATCCGCACGC GCGAAATGCA CCACTTCGCC GAATACGGCG TGGCCGCGCA CTGGCGCTAC
AAGGAGGCCG GCAGCAAGGG CTACGCCGGC CAGTTCTCCG CCAGCGAGCG CTACGACGAG
AAGATCGCCT GGCTGCGCCA GCTGCTGGCC TGGAAGGACG ATGCCGAGCA CACCGTCGCC
CAGGAAGACT CGCCGTGGGA GCAGCTCAAG CATACCGAGC TCGATGACCA CATCTACGTG
CTGACGCCGC AGGCGCGCGT GATCGCGCTG CCGCAGGGCG CCACGCCGGT CGATTTCGCG
TACTACCTGC ACAGCGATCT CGGCCACCGG TGCCGCGGCG CGCGCGTCGA CGGCACGATG
GTGCCGCTGA ACACGCCGCT CAAGAACGGG CAGACGGTCG AGATCGTCAC CGTCAAGCAG
GGTGGGCCGT CGCGCGACTG GCTCAACCCC GAACTGCACT ATCTGGCGAG CAATCGGGCC
CGTGCCAAGG TGCGCGCGTG GTTCAACGCG CTGGAATTGG AAGAAACGCT CGCCCAGGGC
CGCATCCTGA TCGACAAGAC CTTGCAGCGC GAAGGCAAGA CCGCCGTCAA CCTGGAGGAG
CTCGCCGCCA AGCTGGGCTT CAAGACGCCG GACGAGCTGT ACGCCATGGT GGCCAAGGAT
GAGTTCAGCT TGCGCCACGT CGAGGCGGTG CTGCGCACGG ATGGCGCGCC GCCCGCGCCG
GCCGACGACG AGGCGTCGAT CACCAAGAAG AGCCGCGCCA CCAGCGTGGC CCGCGGCGCC
AAGAGCGGCG TGCTGGTGGT GGGGGTCGAT TCGCTGCTCA CGCAGATGTC GCGCTGCTGC
AAGCCTGCGC CGCCGGACCT GATTGTCGGT TTCGTGACCC GTGGGCGCGG CGTGTCGATC
CACCGGCAGA ATTGCGCGAC GTTCCAGCAA CTGGCGGCGC GCGCGCCGGG TCGCGTGATC
CAGACCGAGT GGGGCAACCG CGGCGAGGCG GTCTATCCGG TCGATATCCA CGTCGAGGCG
CTGGACCGCC AGGGGCTGCT GCGCGACATC TCGGAAATCC TCTCGCGCGA GAAGATCAAC
GTGACCGGCG TGCGCACGCT GTCGAGCAAG GGCGTCGCCA AGATGCAGTT CACGGCCGAG
GTATCAGAAG CGACACAATT GCAACGGGCG CTGATATTAA TCGAGGAAGT TACTGGGGTA
TTGTCAGCGC GGCGAAAGTG A
|
|---|
| Protein sequence | MNSKTDRPAE GAGATADRAA REAAVARALE CLADHAGDHQ TLTGEPLVSH ARGTVAILEG
LRVDAPSLQA AALFLLPILA TDNEKAIEPA FGGEVARLVH DVRQLLRIGA IAGMASPAEA
GVTRKNEAEA RRAQVEALRK MLLAFAQDIR VVLIRLASRL QSLRWLAQNK LPAPEGMARE
TLDIYAPLAN RLGIWQLKWE LEDLGFRFED PDTYKRIARL LDEKRIEREQ FIGEAIARLQ
QTLRDAGIHA EVSGRPKHIY SIWRKMRGKD LDFADLYDVR AFRVIVDDIK DCYTVLGFVH
HMWQPIPKEF DDYISRPKTN GYKSLHTVVI GDDGRALEVQ IRTREMHHFA EYGVAAHWRY
KEAGSKGYAG QFSASERYDE KIAWLRQLLA WKDDAEHTVA QEDSPWEQLK HTELDDHIYV
LTPQARVIAL PQGATPVDFA YYLHSDLGHR CRGARVDGTM VPLNTPLKNG QTVEIVTVKQ
GGPSRDWLNP ELHYLASNRA RAKVRAWFNA LELEETLAQG RILIDKTLQR EGKTAVNLEE
LAAKLGFKTP DELYAMVAKD EFSLRHVEAV LRTDGAPPAP ADDEASITKK SRATSVARGA
KSGVLVVGVD SLLTQMSRCC KPAPPDLIVG FVTRGRGVSI HRQNCATFQQ LAARAPGRVI
QTEWGNRGEA VYPVDIHVEA LDRQGLLRDI SEILSREKIN VTGVRTLSSK GVAKMQFTAE
VSEATQLQRA LILIEEVTGV LSARRK
|
|---|
| |