Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1572 |
Symbol | |
ID | 1220403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1687608 |
End bp | 1688387 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237957 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | NP_519693 |
Protein GI | 17546291 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAG GAAAAACCGC CCTGGTGACC GGCTCCACCA GCGGCATCGG CCTGGGCATT GCCTGCGCGC TCGCGGCGCA GGGCGCCAAC ATCGTCATGA ACGGCTTCGG CGACCTGGAC GGGCCCAAGG CCCGGATCGC CGGGGCCGGC AAGGATGCCG TCCGCGTCGG CTACCACGGC GCCGACATGA GCAAGCCCGC CGAGATCGAG GCGATGTTCG CCTACGCCGA TGCCGAATTC GGCGGCGTGG ACATTCTCGT CAACAACGCC GGCATCCAGC ACGTGGCCAA CGTGGAAGAC TTCCCGGCCG AGCGCTGGGA CGCCATCCTC GCCATCAACC TGTCGTCGGC GTTCCACACC ACGCGGCTCG CGGTGCCGGG CATGAAGCGC AAGAACTGGG GCCGCATCGT CAATATCGCC TCCGCGCACG GGCTGGTGGC GTCGGCGCAG AAGTCGGCCT ACGTGGCGGC CAAGCACGGC ATCGTCGGCC TGACCAAGGC GGTGGCACTG GAGACCGCGC AGACCGGCGT TACCGTCAAC GCGATCTGCC CGGGCTGGGT GCTGACGCCG CTGGTGCAGA AGCAGATCGA CGCGCGTGCC GAGAAAGAGG GCATTCCCGT CCTGCAGGCC AAGAAGGAAC TGCTGATGGA GAAGCAGCCC TCCGGCGAAT TCGTCTCGCC CGAGCAGCTC GGCGCGCTGG CGGTGTTCCT GTGCAGCGAG GCCGCCGAGC AGGTGCGCGG CGTGGCGTGG AGCATGGACG GCGGCTGGGT CGCGCAGTAA
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Protein sequence | MLQGKTALVT GSTSGIGLGI ACALAAQGAN IVMNGFGDLD GPKARIAGAG KDAVRVGYHG ADMSKPAEIE AMFAYADAEF GGVDILVNNA GIQHVANVED FPAERWDAIL AINLSSAFHT TRLAVPGMKR KNWGRIVNIA SAHGLVASAQ KSAYVAAKHG IVGLTKAVAL ETAQTGVTVN AICPGWVLTP LVQKQIDARA EKEGIPVLQA KKELLMEKQP SGEFVSPEQL GALAVFLCSE AAEQVRGVAW SMDGGWVAQ
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