| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1570 |
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| Symbol | lpsI |
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| ID | 1220401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1686234 |
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| End bp | 1686932 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237955 |
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| Product | fesuccinyl-CoA:3-ketoacid-coenzyme A transferase subunit A protein |
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| Protein accession | NP_519691 |
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| Protein GI | 17546289 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAA TCTACGCCAG CGCCGCCGAG GCGCTCGCGG GTATCGTCAA GGACGGCCAG
ACCATCGCCG TGGGCGGCTT CGGCCTGTGC GGCATCCCGG AGGCGCTGAT CGGCGCGCTG
CGCGATTCCG GTGCCAAGGG GCTCACCTGC ATTTCCAACA ACGCCGGCGT CGACGGCTTC
GGCCTGGGGC GGCTGCTGGA AACCCGCCAG ATCAAGAAGA TGATCTCGTC CTACGTGGGC
GAGAACAAGG AGTTCGAGCG CCAGTACCTG TCCGGCGAGC TCGAGCTGGA ATTCACCCCG
CAGGGCACGC TGGCCGAGAA GCTGCGCGCC GGCGGCGCCG GCATCCCGGC ATTCTTCACC
CGCACCGGCG TCGGCACCGT GGTGGCCGAC GGCAAGGAGG TGCGCGAATT CGACGGCGAG
CAGTACGTCA TGGAGCGCTC CCTGATCGCC GACGTGGCCC TGGTCAAGGC GTGGAAGGCC
GACAAGTCCG GCAACCTGAA GTACCACCGC ACCGCGCGCA ACTTCAACCC GATGTGTGCC
ATGGCCGGCC GCATCACCAT CGTTGAAGTC GAAGAGATCG TCGAGACCGG CACGTTCGAC
CCGGACGAGG TCCACACCCC GGGCGTGTTC GTGCAGCGCA TCGTGCTGAA CGCCCATCCG
GAAAAACGCA TCGAGCAGCG CACCGTGCGC GCCAAATAA
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| Protein sequence | MNKIYASAAE ALAGIVKDGQ TIAVGGFGLC GIPEALIGAL RDSGAKGLTC ISNNAGVDGF
GLGRLLETRQ IKKMISSYVG ENKEFERQYL SGELELEFTP QGTLAEKLRA GGAGIPAFFT
RTGVGTVVAD GKEVREFDGE QYVMERSLIA DVALVKAWKA DKSGNLKYHR TARNFNPMCA
MAGRITIVEV EEIVETGTFD PDEVHTPGVF VQRIVLNAHP EKRIEQRTVR AK
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