Gene RSc1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1565 
Symbol 
ID1220396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1681174 
End bp1681599 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content69% 
IMG OID637237950 
Productputative FKBP-type peptidyl-prolyl cis-trans isomerase signal peptide protein 
Protein accessionNP_519686 
Protein GI17546284 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TTTCCCTGCT GCTGTGCGCC ACGTCGCTCG CCCTCGCTGC ATACAACGTT 
CAGGCGGCAT CCGCCGTGTC GGCCGCGCCG GCCGAGTCGC TGCCGTCGGG CGTGACCATC
CAGCATGTGG CCAAGGGTAG CGGGCCGTCG CCCAAGGCGA CCGATACGGT CAAGGTGCAC
TATCGCGGCA CGCTGGCCGA CGGCACCGAG TTCGACAGCT CCTACAAGCG CGGCCAGCCG
ATCTCCTTCC CGCTGAATCG CGTGATCCCG TGCTGGACCG AGGGCGTGCA GAAGATGCAG
GTGGGGGGCA AGGCCAAGCT GACGTGTCCG CCGGCGACCG CCTACGGTGC GCGCGGTGTG
CCCGGCACGA TTCCGCCCAA CGCCACGCTG AACTTCGAGG TCGAGCTGCT CGGCATCGGC
GGCTGA
 
Protein sequence
MKRLSLLLCA TSLALAAYNV QAASAVSAAP AESLPSGVTI QHVAKGSGPS PKATDTVKVH 
YRGTLADGTE FDSSYKRGQP ISFPLNRVIP CWTEGVQKMQ VGGKAKLTCP PATAYGARGV
PGTIPPNATL NFEVELLGIG G