Gene RSc1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1563 
Symbol 
ID1220394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1678598 
End bp1679053 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID637237948 
Producthypothetical protein 
Protein accessionNP_519684 
Protein GI17546282 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA GCGACATCCT TCACGTGAAG GGCAACACGC TCTACACCGT GGCCCCGGAA 
ACCAAGCTCC AGGTGGCGGT GCAGACCATG GCGGAATACG ACATCGGCTC GCTGGTGGTG
ATGGAGTACG GCGAGCTGGT CGGCATGCTG ACCTTCCGCG AGATCATCCT GGTGCTCGCC
CGGAACAACG GCAAGGTCGA TGACGGCACC ACCATCCGCA AGGTGATGGA CGATCATCCG
CTCACCTGCA CCCCCGAGAC CGAGGTCAAC GAAGTGCGCC GCATGATGCT GGAGCGGCAT
GCCCGCTACC TGCCGGTGCT CGACAACCGC ACGCTGATGG GCGTGATCTC GTTCTACGAC
GTCGCCAAGG CCGTCTTCGA GGAACAGAAC TTCGAGAACA AGATGCTCAA GGCGTACATC
CGCGACTGGC CGAAGGAAGA GGCCAGCGAA GACTGA
 
Protein sequence
MKVSDILHVK GNTLYTVAPE TKLQVAVQTM AEYDIGSLVV MEYGELVGML TFREIILVLA 
RNNGKVDDGT TIRKVMDDHP LTCTPETEVN EVRRMMLERH ARYLPVLDNR TLMGVISFYD
VAKAVFEEQN FENKMLKAYI RDWPKEEASE D