Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1563 |
Symbol | |
ID | 1220394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1678598 |
End bp | 1679053 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637237948 |
Product | hypothetical protein |
Protein accession | NP_519684 |
Protein GI | 17546282 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCA GCGACATCCT TCACGTGAAG GGCAACACGC TCTACACCGT GGCCCCGGAA ACCAAGCTCC AGGTGGCGGT GCAGACCATG GCGGAATACG ACATCGGCTC GCTGGTGGTG ATGGAGTACG GCGAGCTGGT CGGCATGCTG ACCTTCCGCG AGATCATCCT GGTGCTCGCC CGGAACAACG GCAAGGTCGA TGACGGCACC ACCATCCGCA AGGTGATGGA CGATCATCCG CTCACCTGCA CCCCCGAGAC CGAGGTCAAC GAAGTGCGCC GCATGATGCT GGAGCGGCAT GCCCGCTACC TGCCGGTGCT CGACAACCGC ACGCTGATGG GCGTGATCTC GTTCTACGAC GTCGCCAAGG CCGTCTTCGA GGAACAGAAC TTCGAGAACA AGATGCTCAA GGCGTACATC CGCGACTGGC CGAAGGAAGA GGCCAGCGAA GACTGA
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Protein sequence | MKVSDILHVK GNTLYTVAPE TKLQVAVQTM AEYDIGSLVV MEYGELVGML TFREIILVLA RNNGKVDDGT TIRKVMDDHP LTCTPETEVN EVRRMMLERH ARYLPVLDNR TLMGVISFYD VAKAVFEEQN FENKMLKAYI RDWPKEEASE D
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