| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1556 |
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| Symbol | |
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| ID | 1220387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1672034 |
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| End bp | 1673446 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237941 |
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| Product | oxidoreductase protein |
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| Protein accession | NP_519677 |
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| Protein GI | 17546275 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.94486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACG ATGCCTTCCT GCAGGCCTGC ACCGACGCCA TCGGCGGCGC GCACGTCCTG
ACCGCGCCGG AAGACCAGGC ACCCTATCTG ACCGACTGGC GCAAGCGCTT CACCGGCCGG
GCACGCGCCG TGCTGCGCCC GGCCGATCCC GAGCAGGTCG CCGCGCTGGT GCGCCTGTGC
GCCGGCCATG GCGTGCCGAT CGTCCCGCAG GGCGGCAACA CCGGGCTGTG CGGCGGCGCC
ACGCCCGACG CCGCGGGCAC GGCCGTGGTG ATCTCGCTGC AGCGCCTGCA GCGCGTGCGC
GCGGTCGATC CGATCAACAA CACCATCACC GTGGATGCCG GCTGCATCCT GGCGAGCGTG
CAGGATGCGG CGGCAGCGGC CGACCGCCTG TTTCCGCTGA GCCTGGCCGC GGAAGGCAGC
TGCACCATCG GCGGCAACCT GGCGACCAAT GCCGGCGGCA CGGCCGTGCT GCGCTACGGC
AACGCGCGCG AACTGTGCCT GGGCGTGGAG GCCGTGCTGC CCGACGGCGC GCTGTGGAAC
GGCCTGCGCG GCCTGCGCAA GGACAACACC GGCTACGATC TGCGCGACCT GCTGATCGGT
GCGGAAGGCA CGCTGGGCAT CATCACCGGC GCGACGCTGA AACTGTTTCC GCAGCCACGC
GCGCAGGTGA CGGCCCTGGC TGCATTGGCG TCACCGCGGC AAGCGCTGGC ATTCCTGTCG
CTGGCGCAAA GCCATGCGGG CACGCTGCTG ACGGGGTTCG AGCTGATGTC GGCGTTCTGC
CTGGCGCTGG TGCGCAAGCA CTACCCGCAG TTGCGCGTGC CATTCAGCCA GGCGTATCCG
CAGTACGTCC TGCTCGAACT GTCGGACCTG GAAAGCGAAG CGCACGCGCG CGGCGTGTTC
GAAACCCTGA TGGAAGACGC GCTGGCGCGC GAGGTGATCC TGGACGCCGC CGTCGCGGAA
TCCGTCGCCC AGTCGCGCGC GCTGTGGGAT CTGCGCGAGC ACATCCCGCT CGCCCAGGCC
GACGAAGGCA AGAACATCAA GCACGACATC GCCGTGCCGA TCTCGCGCAT CGCCGACTTC
ATCGACTTGA CCGACCGCGC GCTGGCGGCC GCCTACCCCG GCATCCGCAT GGTGACCTTC
GGCCACCTGG GCGACGGCAA CCTGCACTAC AACGTGTCGC CGCCGGCCGG CCAGGATCAC
GAGACCTTCC TGGCCAACCA GCCCCGCATC AACCGCATCG TGCACGACAG CGTGCACGCG
CACGGCGGCT CGATCTCGGC CGAGCACGGC ATCGGCCAGC TCAAGCGCGA GGACAACGCC
CGCTACAAGA GCCCGGTTGA ATTGGCCGCC ATGCGCGCGA TCAAGCAGGC GCTCGATCCG
CGCGGGCTGA TGAATCCGGG CAAGGTGCTA TAG
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| Protein sequence | MTHDAFLQAC TDAIGGAHVL TAPEDQAPYL TDWRKRFTGR ARAVLRPADP EQVAALVRLC
AGHGVPIVPQ GGNTGLCGGA TPDAAGTAVV ISLQRLQRVR AVDPINNTIT VDAGCILASV
QDAAAAADRL FPLSLAAEGS CTIGGNLATN AGGTAVLRYG NARELCLGVE AVLPDGALWN
GLRGLRKDNT GYDLRDLLIG AEGTLGIITG ATLKLFPQPR AQVTALAALA SPRQALAFLS
LAQSHAGTLL TGFELMSAFC LALVRKHYPQ LRVPFSQAYP QYVLLELSDL ESEAHARGVF
ETLMEDALAR EVILDAAVAE SVAQSRALWD LREHIPLAQA DEGKNIKHDI AVPISRIADF
IDLTDRALAA AYPGIRMVTF GHLGDGNLHY NVSPPAGQDH ETFLANQPRI NRIVHDSVHA
HGGSISAEHG IGQLKREDNA RYKSPVELAA MRAIKQALDP RGLMNPGKVL
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