Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1554 |
Symbol | |
ID | 1220384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1669739 |
End bp | 1670803 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637237938 |
Product | putative integrase/recombinase protein |
Protein accession | NP_519675 |
Protein GI | 17546273 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACGA TCATCGAGAA GTACACGAAG CGAGGCGAAG TCCGGTTCCA GGCAAAGATT CGCCGCACTG GTGTCCCGAT TGCCTCGAAA GTATTCCCTT CCCGGGAAGA AGCAGAGGCT TGGATACAGG CCACCGAGCC TGAGCTGCAG GCTCGGTCCC GACAGGCTGC TCGCCAACAA GCCCAGGCGA AGCTGATAGC AAAGTTCAAA GACCGCCCGC GCATCGTTGC CGACTTGCTC CACCGGCACA TGCAAGAGGA GACTGTCCGC AAAAAGGGAG CGGAGGCTGA GACCCACCAC ATCAGTAGCA TCCTGCGGTA CCCGCTTGCC CGCATCCATT TGGACAACCT GACACGCAGC GACATCAAGG AATGGCGAGA CCAAAGGCTG CAGGACGTTG CGCCCAGTAC CGTCAATCGA GAACTAAACA TCATCAACGC GGCACTCAAG GTGGCCGTTC ACGAATGGGA CGTTGCGATC TGCCAAAGCG TGCTCACGTC TGTGCGCCGC CCAAGCAATC CGCCGGGGCG TGTACGAAGG CTGTCCCCCG AGGAGGAAGC CGCACTGAGA CAGGCAGGCG AGGAAACGCG GAATCCCTAC ATCGTGCCCA TCTTGGATTT GGCCCTAAAC ACGGCCATGC GGCGCGGTGA AATACTCGGG CTGGAGTGGG AGCGCATCAG CTTCGCTCAC CGCTCTATTC AGCTCATCGA GACGAAGAAT GGAACGCCCC GAGGTGTGCC TCTTTCGCGG CATGCGATGA AGGTACTGGC TACGCTGAAA CAGGTGGCGG CCCACGAACT TGGCTACGAG GGCGAGCTGA ACTCTGGTCC GGTGTTTCCT GGTCTTACCG CCAACGCTTT CAAGCTGGCG TTCAACCGCA TGATGGAGCG CGCAGGGTTG GAGAACTTCC GGTTCCACGA CCTGAGGCAC GAGGCCACGA GCCGCCTCTT TGAGAAAGGG CTATCCGTCA TGGAGGTGGC TTCCATTACC GGGCACAAGG ACATCAGGAT GCTTCAGCGC TACACCCACC TACAGGTCAA GGACTTGGCG GCGAAGCTGG ACTAG
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Protein sequence | MGTIIEKYTK RGEVRFQAKI RRTGVPIASK VFPSREEAEA WIQATEPELQ ARSRQAARQQ AQAKLIAKFK DRPRIVADLL HRHMQEETVR KKGAEAETHH ISSILRYPLA RIHLDNLTRS DIKEWRDQRL QDVAPSTVNR ELNIINAALK VAVHEWDVAI CQSVLTSVRR PSNPPGRVRR LSPEEEAALR QAGEETRNPY IVPILDLALN TAMRRGEILG LEWERISFAH RSIQLIETKN GTPRGVPLSR HAMKVLATLK QVAAHELGYE GELNSGPVFP GLTANAFKLA FNRMMERAGL ENFRFHDLRH EATSRLFEKG LSVMEVASIT GHKDIRMLQR YTHLQVKDLA AKLD
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