Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1550 |
Symbol | tISRso8a |
ID | 1220380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1662651 |
End bp | 1662944 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637237934 |
Product | ISRSO8-transposase orfA protein |
Protein accession | NP_519671 |
Protein GI | 17546269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.682761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCAAGG TACCGAAACA GTCATACACG GCGGAGTTCA AGGCGGCAGC CGTACAACGA GTCAAAGACG GGCAAGGCGT GGGTGCGGTG GCCCGCGAGT TGAGCGTCTC GGAGCAGACG CTGCGCAACT GGATGAAGGC CGAGCAGGCT GGCAAGCTGG GCGGCGCCGG CGCGAAGGTC GTCACGCCGG AGCAGATGGA GCTCTCGCGC CTGCGCGCCG AGAACAAGCG GCTGCAAATG GAACTCGAAA TCGCAAAAAA GGCGGCGGCG TACTTCGCGA AAGACCTGCT GTGA
|
Protein sequence | MFKVPKQSYT AEFKAAAVQR VKDGQGVGAV ARELSVSEQT LRNWMKAEQA GKLGGAGAKV VTPEQMELSR LRAENKRLQM ELEIAKKAAA YFAKDLL
|
| |