Gene RSc1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1550 
SymboltISRso8a 
ID1220380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1662651 
End bp1662944 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID637237934 
ProductISRSO8-transposase orfA protein 
Protein accessionNP_519671 
Protein GI17546269 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.682761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG TACCGAAACA GTCATACACG GCGGAGTTCA AGGCGGCAGC CGTACAACGA 
GTCAAAGACG GGCAAGGCGT GGGTGCGGTG GCCCGCGAGT TGAGCGTCTC GGAGCAGACG
CTGCGCAACT GGATGAAGGC CGAGCAGGCT GGCAAGCTGG GCGGCGCCGG CGCGAAGGTC
GTCACGCCGG AGCAGATGGA GCTCTCGCGC CTGCGCGCCG AGAACAAGCG GCTGCAAATG
GAACTCGAAA TCGCAAAAAA GGCGGCGGCG TACTTCGCGA AAGACCTGCT GTGA
 
Protein sequence
MFKVPKQSYT AEFKAAAVQR VKDGQGVGAV ARELSVSEQT LRNWMKAEQA GKLGGAGAKV 
VTPEQMELSR LRAENKRLQM ELEIAKKAAA YFAKDLL