| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1549 |
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| Symbol | tISRso8b |
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| ID | 1220379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1661764 |
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| End bp | 1662654 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637237933 |
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| Product | ISRSO8-transposase orfB protein |
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| Protein accession | NP_519670 |
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| Protein GI | 17546268 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.797187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGTACG CCTGGATTGA CCAGCAGTGT CGGCACTATC CGCTGTCGGC GCTGTGCGGG
GTCCTCTCGG TCAGCGTCAA CGGCTATCGT GCCTGGAGGC GAGGCGGCAC GCCCGAGCGC
AAGCGGCTCA CCGACACGCA ATTGCTCACA TTGATTCGGG CCATCCATGC GCAGTTCAAG
GGCGCCTATG GCTCGCCGCG CATGACCGAA GAGATTCGCG CACGCGGGTT CCCGGCCAGC
AAAGCGCGCG TGGAACGCCT GATGAGCCAG AACGGCATCC GGGCACGCCA CAAGCGCCGT
TATCGGGTCA CGACCGATTC CAGGCACAAG CTGCCGGTCG CGCCGAACCT GCTGAACCGC
GAGTTCACGC CGGCCGAGCC GAATCAGGTG TTCAGTTCGG ACATCACATA CATCTGGACC
GACGAGGGCT GGCTGTATCT GGCCGTGGTG CTGGACCTGT TCAATCGGGA AGTCATGGGT
TGGTCCATCA AGCCGCGCAT GACGGCAGAC CTGGTGACCG ACGCACTGAC GATGGCGTGG
TTCCGCCGCA AGCCCGCGCC CGGCGCGCTG CATCATTCGG ACCGTGGCAG CCAGTACGCG
AGCCACGAAT TCCAGCGCAA GCTGGCCGAA TACGGCATGC GCTGTTCGAT GAGCCGCAAG
GGAAATTGTT GGGACAACGC ACCGACTGAG AGCTTCTTCA ACAGCCTGAA GAACGAACGG
GTGCATGCCA CGCGCTACCG GACGCATCAG GAGGCTGCGG CGGACCTGTT CGAATACATC
GAAGTGTTTT ATAACCGCAG TCGCCGTCAT TCGTCGCTCG GCTTTGTCTC GCCAGCTCAG
TTCATGCAGG ACTGGCTCAA GGCTCAACAG GTGAAGGAAA CGGCTGCATA A
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| Protein sequence | MKYAWIDQQC RHYPLSALCG VLSVSVNGYR AWRRGGTPER KRLTDTQLLT LIRAIHAQFK
GAYGSPRMTE EIRARGFPAS KARVERLMSQ NGIRARHKRR YRVTTDSRHK LPVAPNLLNR
EFTPAEPNQV FSSDITYIWT DEGWLYLAVV LDLFNREVMG WSIKPRMTAD LVTDALTMAW
FRRKPAPGAL HHSDRGSQYA SHEFQRKLAE YGMRCSMSRK GNCWDNAPTE SFFNSLKNER
VHATRYRTHQ EAAADLFEYI EVFYNRSRRH SSLGFVSPAQ FMQDWLKAQQ VKETAA
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