Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1548 |
Symbol | |
ID | 1220378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1661338 |
End bp | 1661625 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637237932 |
Product | transposase |
Protein accession | NP_519669 |
Protein GI | 17546267 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.34059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA AGAGATACAC CGAGGAATTC AAGGTCGAGG CGGTCAATCA GGTTTTGGAC AGAGGTCACA GCGTTGCCGA GGTCGCGCAG CGGCTGGGCG TGAGCCAACA CAGCCTGTAC CAGTGGATCA AACAACGACG CCAACCCGTG GCGCAACCGC AAGGGCAGGT ATCGCCATCC GACGAGGTAC GCAGGCTCAA GGCCGAGCTC AAACGGGTGA CCGAGGAGCG CGACATCCTA AAAAATGTCC GCTGTCAAGC TTATTGTGCA ACTGGACAGC AACGCTAA
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Protein sequence | MSAKRYTEEF KVEAVNQVLD RGHSVAEVAQ RLGVSQHSLY QWIKQRRQPV AQPQGQVSPS DEVRRLKAEL KRVTEERDIL KNVRCQAYCA TGQQR
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