Gene RSc1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1548 
Symbol 
ID1220378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1661338 
End bp1661625 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content58% 
IMG OID637237932 
Producttransposase 
Protein accessionNP_519669 
Protein GI17546267 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.34059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA AGAGATACAC CGAGGAATTC AAGGTCGAGG CGGTCAATCA GGTTTTGGAC 
AGAGGTCACA GCGTTGCCGA GGTCGCGCAG CGGCTGGGCG TGAGCCAACA CAGCCTGTAC
CAGTGGATCA AACAACGACG CCAACCCGTG GCGCAACCGC AAGGGCAGGT ATCGCCATCC
GACGAGGTAC GCAGGCTCAA GGCCGAGCTC AAACGGGTGA CCGAGGAGCG CGACATCCTA
AAAAATGTCC GCTGTCAAGC TTATTGTGCA ACTGGACAGC AACGCTAA
 
Protein sequence
MSAKRYTEEF KVEAVNQVLD RGHSVAEVAQ RLGVSQHSLY QWIKQRRQPV AQPQGQVSPS 
DEVRRLKAEL KRVTEERDIL KNVRCQAYCA TGQQR