| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1544 |
|---|
| Symbol | |
|---|
| ID | 1220374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1650155 |
|---|
| End bp | 1651015 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637237928 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519665 |
|---|
| Protein GI | 17546263 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0501605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC AGATTTCGAC GTTCTTCGAT TCCGATACCT GCACCATGAC CTACGTGGTC
CATGGCGGGC CGGGCACGCC GTGCGCGGTG ATCGATTCGG TGCTCGACTA CGATCCCAAA
TCCGGCCGCA CCCGGACCGG CTCGGCGGAC CGGGTGGCGG CCTACATCGA GGCGAACGCG
CTGCGGGTCG AGTGGCTGCT CGAGACGCAT GCCCACGCGG ACCACCTGTC GGCCGCGCCG
TACCTGCGCA ACCGGTTCGG TGGGCGCATT GCCATCGGCG AGCGCATCCG GGTGGTGCAG
GGCGTGTTCA AGCCGATCTT CAACCTGGAG CCGTCGTTCC GGCTCGACGG CTCGCAGTTC
GACCACCTGT TCGCCGCGGA CGAGGTGTTC CGCATCGGCG CGCTGGAAGC GAAGGCGCTG
TCGGTGCCCG GTCACACGCC GGCCGACATG GCCTACCAGG TGGGCGACGC CGTGTTCGTG
GGCGATACGC TGTTCATGCC GGATGTCGGC ACCGCCCGCT GCGATTTTCC CGGCGGCGAC
GCGCGCACGC TGTACCAGTC GATCCGCCGC CTGCTGGACT TGCCGCCGCA GACGCGGCTC
TACATGTGCC ATGACTATCC GCCCGCCGGC CGCGAGGCGA CCTGCGAGAC CACGGTGGCC
GAGCAGCGCC GCGCCAATAT CCATGTGCGC GACGGCGTGA CGGAAGACGA CTTCGTGCAG
ATGCGCACCC GGCGCGACGC CACGCTGGCC ATGCCGACGC TGATGCTGCC GTCCATCCAG
GTCAACATCC GGGCGGGCGC GCTGCCGCCG GCCGAGCCGA ATGGCGTGCG GTATCTGAAG
ATTCCGCTGA ACGCGCTGTG A
|
|---|
| Protein sequence | MPAQISTFFD SDTCTMTYVV HGGPGTPCAV IDSVLDYDPK SGRTRTGSAD RVAAYIEANA
LRVEWLLETH AHADHLSAAP YLRNRFGGRI AIGERIRVVQ GVFKPIFNLE PSFRLDGSQF
DHLFAADEVF RIGALEAKAL SVPGHTPADM AYQVGDAVFV GDTLFMPDVG TARCDFPGGD
ARTLYQSIRR LLDLPPQTRL YMCHDYPPAG REATCETTVA EQRRANIHVR DGVTEDDFVQ
MRTRRDATLA MPTLMLPSIQ VNIRAGALPP AEPNGVRYLK IPLNAL
|
|---|
| |