Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1542 |
Symbol | |
ID | 1220372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1648310 |
End bp | 1649575 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237926 |
Product | putative transmembrane protein |
Protein accession | NP_519663 |
Protein GI | 17546261 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0588394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCCT CCCCCAACGC CAACCCGAAC CCGCCCCACC ATCCGCCCAC CGAAGTCCTG ATCATCGGTG GCGGCGCCGC CGGCATCGGC GTGGCCGCGA GCCTGCGCCG CCGCCGGCCG CAGTTGGACA TCGCGATCAT CGAGCCGAGC GATGCCCATT ACTACCAGCC GGCCTGGACG CTGGTCGGCG GCGGCGCGTT CGACGCTGGC CGCACCGTGC GGCAGACCGA TGCGCTGATC CCGGCAGGCG TGCGCCGCAT CCGCGCCAGC GCCACGCACA TCGATACCGA GACCCACCGC GTGTCGCTCG ATGACGGTCG CAGCGTGCGG TACAGCCAGC TGATCGTCAG CCCCGGCCTG CGACTGGCCT GGGAGCGCAT CGACGGGCTG GAGGCGGCGC TGGGGCAGCA TGGCGTCACC TCCAACTACC GCTTCGACCT CGCCCCCTAC ACCTGGTCGC TGGTGCGCAG CCTGCGCTCG GGGCGCGCGC TGTTCACGCA GCCGGCCATG CCGATCAAGT GCGCCGGCGC GCCGCAGAAG GCGATGTACC TGGCCTGCGA CCACTGGCGC CGCACCGGTG TGCTCGATCG CATCGACGTG GAGTTCAATC TGACCGGCAC CACGCTGTTC GGCGTCGAAG CCTTCGTGCC GGCGCTCATG CGCTACGTGG AGCACTACCG CGCCGGGCTG GCCTTCGGCT CCACGCTGGT GGCTGTCGAC GGCCCGGCGC ACACGGCCTG GTTCGAGCAC AAGAACGCGG ACGGCGAAAC GGTCCGCGCT GCCAAGCGCT TCGACCTGCT GCACGCGGTG CCGCCCCAGG TGGCGCCTGC CTTCATCGCG CAGAGCGGCC TGGGCGATGC CGCCGGCTGG TGCGAAGTCG ACCCGGCCAC ACTGCAGCAC GTCCGCCACG CCGATGTGTT CTCGCTCGGC GACGCCTGCT CGACACCCAA CGCCAAGACC GCGGCCGCCG TGCGCAAGCA GGCCGTGGTG GTCGCGGAAA ACCTGCTCGC CCACCGCGAC CGGCAACCCC TGCCGACACG CTACGACGGC TACGGCGGCT GTCCCCTGAC GGTCGAGCGC GGCAAGGTCG TCCTCGCGGA GTTCGGCTAC GGCGGCAAGC TGCTGCCGAC CTTTCCGCTG GCGCCGACCG TGGCGCGCCA GTCGGCATGG TGGCTCAAGA CCACCGTGCT GCCGTGGCTG TACTGGAACG GGCTGCTCAA GGGCCGCGAG TGGCTGGCCC GCCCGAGCCT GCCGGTGGAG CGCTGA
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Protein sequence | MPPSPNANPN PPHHPPTEVL IIGGGAAGIG VAASLRRRRP QLDIAIIEPS DAHYYQPAWT LVGGGAFDAG RTVRQTDALI PAGVRRIRAS ATHIDTETHR VSLDDGRSVR YSQLIVSPGL RLAWERIDGL EAALGQHGVT SNYRFDLAPY TWSLVRSLRS GRALFTQPAM PIKCAGAPQK AMYLACDHWR RTGVLDRIDV EFNLTGTTLF GVEAFVPALM RYVEHYRAGL AFGSTLVAVD GPAHTAWFEH KNADGETVRA AKRFDLLHAV PPQVAPAFIA QSGLGDAAGW CEVDPATLQH VRHADVFSLG DACSTPNAKT AAAVRKQAVV VAENLLAHRD RQPLPTRYDG YGGCPLTVER GKVVLAEFGY GGKLLPTFPL APTVARQSAW WLKTTVLPWL YWNGLLKGRE WLARPSLPVE R
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