Gene RSc1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1529 
SymbolpstS1 
ID1220358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1633357 
End bp1634388 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content64% 
IMG OID637237912 
Productphosphate ABC transporter phosphate-binding protein 
Protein accessionNP_519650 
Protein GI17546248 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.568086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGG TCAAGACTGC GATTGCGGGC GTTGTTTCGC TGGCTTTCGC TGGTATCGCG 
TTTGCCGCCG ACATCACCGG CGCTGGCGCG ACGTTCCCGG CGCCTGTCTA TAACAAGTGG
GCTGACGCCT ATCAGAAGGC CACCGGCACC AAGGTGAACT ATCAAGGCAT CGGCTCGTCG
GGCGGCATCA AGCAGATCAC CGCCAAGACC GTCGATTTCG GCGCCTCGGA CATGCCGCTC
AAGGATGACG AGCTGAGCAA GGACGGCCTG CTGCAATTCC CGACCGTGAT CGGCGGCGTG
GTGCCGGTGA TCAATCTGCC GGGCGTGAAG CCGGGCGAGC TGGTCCTGAC GGGCCAGGTG
CTGGGCGACA TCTACCTGGG CAAGGTCAAG AAGTGGAATG ACCCGGCCAT CGTCAAGCTG
AATCCGAAGG CCAAGCTGCC GGACCAGGAC ATCCTGGTGG TGCGCCGTGC TGACGGTTCG
GGCACCTCGT TCATCTTCAC GAACTACCTG TCGAAGGTGA GCGCCGAGTG GAAGGGCAAG
GTCGGCGAAG GCACGACCGT GAACTGGCCG ACCGGCACGG GCGGCAAGGG CAACGAAGGC
GTGGCCGCCT TCGTGCAGCG TCTGGGTGGC GCGATCGGCT ACGTCGAGTA CGCCTACGCC
AAGCAGAACC ACATGACCCA CATCAATCTG CAGAACGCCT CGGGCGCCGT GGTGCAGCCG
ACCAGCGACG CCTTCAAGGC CGCCGCTGCC GGCGCCGACT GGAGCAAGTC GTTCTACCAG
ATCCTGACCA ACCAGCCGGG CAAGGACGCA TGGCCGATCG CCGGCGCGAC CTTCATCCTG
GTGCACAAGA CCCAGGACAA GCCGGTCCAG GGCACCGAGG TCCTGAAGTT CTTCGACTGG
GCCTACAAGA ACGGCGGCAA GGATGCTTCC GCGCTGGACT ACGTGCCGCT GCCGGACCCG
GTGCTGAACC AGATTCGCGC CACCTGGAAG TCGGGCGTGA AGGACGCTTC GGGCAAGCCG
ATCTACAACT GA
 
Protein sequence
MKLVKTAIAG VVSLAFAGIA FAADITGAGA TFPAPVYNKW ADAYQKATGT KVNYQGIGSS 
GGIKQITAKT VDFGASDMPL KDDELSKDGL LQFPTVIGGV VPVINLPGVK PGELVLTGQV
LGDIYLGKVK KWNDPAIVKL NPKAKLPDQD ILVVRRADGS GTSFIFTNYL SKVSAEWKGK
VGEGTTVNWP TGTGGKGNEG VAAFVQRLGG AIGYVEYAYA KQNHMTHINL QNASGAVVQP
TSDAFKAAAA GADWSKSFYQ ILTNQPGKDA WPIAGATFIL VHKTQDKPVQ GTEVLKFFDW
AYKNGGKDAS ALDYVPLPDP VLNQIRATWK SGVKDASGKP IYN