Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1529 |
Symbol | pstS1 |
ID | 1220358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1633357 |
End bp | 1634388 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237912 |
Product | phosphate ABC transporter phosphate-binding protein |
Protein accession | NP_519650 |
Protein GI | 17546248 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
TIGRFAM ID | [TIGR00975] phosphate ABC transporter, phosphate-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.568086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGG TCAAGACTGC GATTGCGGGC GTTGTTTCGC TGGCTTTCGC TGGTATCGCG TTTGCCGCCG ACATCACCGG CGCTGGCGCG ACGTTCCCGG CGCCTGTCTA TAACAAGTGG GCTGACGCCT ATCAGAAGGC CACCGGCACC AAGGTGAACT ATCAAGGCAT CGGCTCGTCG GGCGGCATCA AGCAGATCAC CGCCAAGACC GTCGATTTCG GCGCCTCGGA CATGCCGCTC AAGGATGACG AGCTGAGCAA GGACGGCCTG CTGCAATTCC CGACCGTGAT CGGCGGCGTG GTGCCGGTGA TCAATCTGCC GGGCGTGAAG CCGGGCGAGC TGGTCCTGAC GGGCCAGGTG CTGGGCGACA TCTACCTGGG CAAGGTCAAG AAGTGGAATG ACCCGGCCAT CGTCAAGCTG AATCCGAAGG CCAAGCTGCC GGACCAGGAC ATCCTGGTGG TGCGCCGTGC TGACGGTTCG GGCACCTCGT TCATCTTCAC GAACTACCTG TCGAAGGTGA GCGCCGAGTG GAAGGGCAAG GTCGGCGAAG GCACGACCGT GAACTGGCCG ACCGGCACGG GCGGCAAGGG CAACGAAGGC GTGGCCGCCT TCGTGCAGCG TCTGGGTGGC GCGATCGGCT ACGTCGAGTA CGCCTACGCC AAGCAGAACC ACATGACCCA CATCAATCTG CAGAACGCCT CGGGCGCCGT GGTGCAGCCG ACCAGCGACG CCTTCAAGGC CGCCGCTGCC GGCGCCGACT GGAGCAAGTC GTTCTACCAG ATCCTGACCA ACCAGCCGGG CAAGGACGCA TGGCCGATCG CCGGCGCGAC CTTCATCCTG GTGCACAAGA CCCAGGACAA GCCGGTCCAG GGCACCGAGG TCCTGAAGTT CTTCGACTGG GCCTACAAGA ACGGCGGCAA GGATGCTTCC GCGCTGGACT ACGTGCCGCT GCCGGACCCG GTGCTGAACC AGATTCGCGC CACCTGGAAG TCGGGCGTGA AGGACGCTTC GGGCAAGCCG ATCTACAACT GA
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Protein sequence | MKLVKTAIAG VVSLAFAGIA FAADITGAGA TFPAPVYNKW ADAYQKATGT KVNYQGIGSS GGIKQITAKT VDFGASDMPL KDDELSKDGL LQFPTVIGGV VPVINLPGVK PGELVLTGQV LGDIYLGKVK KWNDPAIVKL NPKAKLPDQD ILVVRRADGS GTSFIFTNYL SKVSAEWKGK VGEGTTVNWP TGTGGKGNEG VAAFVQRLGG AIGYVEYAYA KQNHMTHINL QNASGAVVQP TSDAFKAAAA GADWSKSFYQ ILTNQPGKDA WPIAGATFIL VHKTQDKPVQ GTEVLKFFDW AYKNGGKDAS ALDYVPLPDP VLNQIRATWK SGVKDASGKP IYN
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