Gene RSc1518 details

Gene Information

• Locus tag: RSc1518
• Symbol: prpE
• ID: 1220347
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1618904
• End bp: 1620802
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637237901
• Product: propionyl-CoA synthetase
• Protein accession: NP_519639
• Protein GI: 17546237
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCATGT CCGACGCCTA TCGCGCGCTG TACCAGCGTT CCATCGACGA TCCCGCCGCC 
TTCTGGGGCG AGCAGGCGCA GCGCATCGAC TGGCAGACGC CCTACGCCGC CGTGCTCGAC 
GATGCGCGGC TGCCGTTCGC GCGCTGGTTC GTCGGCGGGC GCACCAACCT GTGCCACAAC 
GCCGTCGACC GCCATCTCGC CACGCGCGGC GAGCAGGCCG CGCTGGTGTA TGTCTCCACC 
GAGACCGGCA TCGAGACGAC CTACACGTAC CGAGCGCTGC ATCGCGAGGT CAACCGCATG 
GCGGCGTGCC TGCAAGCGCT GGGCGTCAGG CGCGGCGATC GCGTGCTGAT CTACCTCCCG 
ATGATCCCGG AAGCGGCGTT CGCCATGCTG GCCTGCGCGC GCATCGGCGC GATCCATTCG 
GTGGTGTTCG GCGGCTTCGC CTCCAACAGC CTCGCCACCC GCATCGACGA CGCCACTCCG 
CGCGTCATCG TCAGCGCCGA CGCCGGCTCG CGCGGCGGCA AGGTGGTCGA ATACAAGCCG 
CTGCTCGATG CCGCCATCGA CCTCGCCGTG CACAAGCCGG CGCACGTCCT GCTGGTCGAC 
CGCAAACTTG CCCCGATGCA GCACCGGCCG CACGACATTG ACTACGCCGC GCTGGCCCGG 
CAGCACACCC ACGCCGACGT GCCGTGCGAA TGGATGGAGT CGAGCGAGCC GTCCTACATC 
CTCTACACCT CGGGCACCAC CGGCAAGCCC AAGGGCGTGC AGCGCGACAC CGGCGGCTAC 
GCGGTGGCGC TGGCCGCGTC GATGCCGCTG ATCTTCGGCG CGCAGGCGGG CGACACCATG 
TTCACCGCGT CGGACGTCGG CTGGGTGGTC GGCCACAGCT ACATCGTCTA CGCGCCGCTG 
CTGGCGGGGC TTGCCACCGT GATGTACGAG GGCACGCCGG TCCGCCCCGA CGGCGCCATC 
TGGTGGCGCA TCGTCGAGCA ATACCGCGTC AACGTGATGT TCACCGCGCC CACGGCCATC 
CGCGTGCTGA AGAAGCAGGA TCCGGCGCTG CTGCGGCGGC ATGACCTGTC CAGCCTGCGG 
CGCCTGTTCC TGGCCGGCGA GCCGCTCGAC GAGCCCACCG CTCGCTGGAT CGGCGACGCG 
CTCGGCAAGC CCATCATCGA CAACTACTGG CAGACCGAGA CCGGCTGGCC GATGCTGGCG 
ATCCCGCAGG GCGTGGCGCC CTCGACGCCC AAGCTGGGCT CGCCCGGCTT CCCGGTCTAC 
GGATACCGGC TCGACATCCT CGACGAGGCG ACGGGCCAGC CCTGCGCGCC GGGCGAAAAG 
GGCCTGCTGG CCGTCGCCGC GCCGCTGCCG CCGGGCTGCA TGAGCACCGT GTGGGGCGAC 
GATGCACGCT TCCTCAAGAC GTACTGGTCC GCCTTCCCCG GGCGCCCGCT CTATTCCAGC 
TTCGACTGGG GCGTGCGCGA TGAAGCGGGC TACATCACCA TCCTCGGCCG CACCGATGAC 
GTGATCAACG TGGCCGGCCA TCGCCTGGGC ACGCGCGAGA TCGAAGAGAG CCTGTCGTCG 
CATCCGGCGA TCGCCGAGGT GGCGGTGGTG GGGGTGGCCG ACCCGCTGAA GGGGCAGGTG 
GCGATGGGGT TTGCCATCGT GCGCGATGCG GCCCGCGTTG CCGAGCCGGC TGGCCGCATG 
GCGCTGGAGG GCGAACTGAT GCGCACGGTG GAGGGGCAGT TGGGCGCCGT GGCGCGGCCG 
TCGCGCGTGT TCTTCGTCAA CGCGCTGCCG AAGACGCGCT CGGGCAAGCT GCTGCGCCGG 
GCCATGCAGG CGGTGGCCGA GGGGCGCGAT CCCGGCGACC TGACTACCAT CGAGGACCCG 
ACCGCGCTTG CCCAGGTGCG CGAGGCGATG CAGGCGTGA 

 

Protein sequence

MPMSDAYRAL YQRSIDDPAA FWGEQAQRID WQTPYAAVLD DARLPFARWF VGGRTNLCHN 
AVDRHLATRG EQAALVYVST ETGIETTYTY RALHREVNRM AACLQALGVR RGDRVLIYLP 
MIPEAAFAML ACARIGAIHS VVFGGFASNS LATRIDDATP RVIVSADAGS RGGKVVEYKP 
LLDAAIDLAV HKPAHVLLVD RKLAPMQHRP HDIDYAALAR QHTHADVPCE WMESSEPSYI 
LYTSGTTGKP KGVQRDTGGY AVALAASMPL IFGAQAGDTM FTASDVGWVV GHSYIVYAPL 
LAGLATVMYE GTPVRPDGAI WWRIVEQYRV NVMFTAPTAI RVLKKQDPAL LRRHDLSSLR 
RLFLAGEPLD EPTARWIGDA LGKPIIDNYW QTETGWPMLA IPQGVAPSTP KLGSPGFPVY 
GYRLDILDEA TGQPCAPGEK GLLAVAAPLP PGCMSTVWGD DARFLKTYWS AFPGRPLYSS 
FDWGVRDEAG YITILGRTDD VINVAGHRLG TREIEESLSS HPAIAEVAVV GVADPLKGQV 
AMGFAIVRDA ARVAEPAGRM ALEGELMRTV EGQLGAVARP SRVFFVNALP KTRSGKLLRR 
AMQAVAEGRD PGDLTTIEDP TALAQVREAM QA