Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1498 |
Symbol | |
ID | 1220327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1603642 |
End bp | 1604232 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237881 |
Product | hypothetical protein |
Protein accession | NP_519619 |
Protein GI | 17546217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00731295 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCCGG AACTCGCCCG GCGCAGGTTC ATGATCGTTC CGGCGCTCAT CGACGAGCGA TGGGCGGGGA TGCTCTATTA CGTCCTGCTG CTGCGGAACT GGCGGGGCGA GGCCAAGCAC GACCGCCAGT CGCCGGCGGC CGACAGCCAT TGGGGCGACG CTACCCTGGA TGCCACGCTG CTGGCTCTGA AGTCCGGCAT CGAGCAGGTG TGCGGCTGCT GGCTTCTGCC CACCTACGCC TACGCCCGGC TCTACTTCCA CGGAGACGAT CTGGCGCGTC ATCGCGACCG GGCCGCCTGC CAGATCGCGG CGACGATTCA TCTGGGCTCC AGCGATGGCC ACGCGCCGCC GATCTGGTTC GAGCCCGACG TTGCCGTCGC CCAGCGGCCG GGCGATGCGG TCGTCTATCT TGGCGACAGC ATCGACCACT GGCGCGAGCC GTTCGGCGGC GAGAACTTTG GCCAACTGTT CCTGAACTAC GTCTTCGCCG ACGGCGAGCG GGCCGGGCTG CTCCACGACG GGCGGCGCAA CGCGTTTCCG CCCTCGCTCT CGCCCCGGCC GGCGGCGGCC ATGCCGGGGT GCGTCCGATG A
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Protein sequence | MVPELARRRF MIVPALIDER WAGMLYYVLL LRNWRGEAKH DRQSPAADSH WGDATLDATL LALKSGIEQV CGCWLLPTYA YARLYFHGDD LARHRDRAAC QIAATIHLGS SDGHAPPIWF EPDVAVAQRP GDAVVYLGDS IDHWREPFGG ENFGQLFLNY VFADGERAGL LHDGRRNAFP PSLSPRPAAA MPGCVR
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