| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1473 |
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| Symbol | |
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| ID | 1220302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1575853 |
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| End bp | 1577406 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237856 |
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| Product | putative multidrug resistance-like transmembrane protein |
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| Protein accession | NP_519594 |
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| Protein GI | 17546192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.174414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.117108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CAAGCACGGA CCACACGCCT TCCGCCCAGT CGGCGCCGCG CCGCCAGCCG
GCCGGATCGA CGGTCGCCAG CCGGCTGGAG CTGCGCATGG TCGGCATGGT GATCGGCCTG
GCGACCGGCG TGGATTACAT GGCCAACCTG ATGTTCTCGA TCGCCGGGCC GCATATCGAG
GGCGGGGTGC TGGCCTCGCA GGACGTCTAC CTGTGGGCGG TGACGTCCTA TGCGGCGGCG
GCCAGCCTGG CGATCCTGGT GATGGGACGG CTGGCCGACC GGATGACCTA TCGCCGGCAC
ACGCTGCTGT CGCTGCTGAT CTTCATTGCC GGCACGCTGA TGTGCGCGGC GGCCGAGGGC
GGCACCATGC TGATCTTCGG GCGGGCCGTA CAGGGCTTCG GTGGCGGGCC GATGCTGTCC
ACGTCGCGCA TCTTCGTGCA GCACAGCCCG GCACACGAGC GCCGCACCAT GATGAAGGGG
ATGATCTACG GCATCTTCGG GCTGACCTGC GTCTCGCCGG TGCTCTCCGC CGCGCTGACG
GAGCAGTTCG GCTGGCGCGC CATCTTCGTG GCCCAGTTGC TGGTGGCGGT GATGGTGTGC
GGCCTGGTGG CGGCGTTCTA CCCGCATCCC CACCAGCATG AACGCACGGG CGACTTCGCC
TCGCTGGACT GGCCCTCCGC CATCGCTTTC GGCCTCGCCG CGCTGATCGC GCTGCACGGC
TTCCAGCAGG CGCGCTTCGT GCACCCCGAC GGCTCGCCGG CGCAGGTGCT GCCCATCCTG
GCCGTGGTCG CGCTGGTCGC CTGGATCGGC ATCCGCCAGA CCGGGCACCC GCTGCCGTGG
GTGGACCTGC GCGCCACGTT GCAGCGCCGC TTCATAGTGG GCATGGTGTT CTATGCCATC
TACTACGGCT TTGCCAGCGC GTGGAGCTTC CTGTCCTCCA GCCTGCTGCA GAACGGCCTG
GGCTTCCGCT ACGAGACCAC CGCGCAGTTC ATGAGCCTGT CGGGGCTGGT GACGCTGCTG
CTGGGCATCG CCAACTTCCA GTTGACCGAT TACCTGCCGC GCAAGCACGT GCTGATCGCC
ATCGGTTTCG TGTTGATGGC GGGCGCGATG CTGTGGCTGT CGCGCACGGC CATGCCCGGC
GCATCGGCCG GCGTGCTGGC GCCGGGGTTC GTGATGGAGG GCATGGTCGG CATGCTGGTG
GTGATCCAGG TGGCGGGGCT GACCTATGTC GACCTGCCCG CCGAGGACTT CGGCCATGCC
TACCAGTTCA AGGGCATCAT GCGCGCCTGG GCCCAGGCCT TCGGCACGCT GCTGGCGACG
CTGATGCTGC AGCGCGGACA GGCGCAGCAC CGCACCGACC TGGTCGGCCA TGTCTCGGCG
CTGACGCCGT CGTGGCTGTG GCCGCATCCG CTGCAGGGTG CGGAATTGGT GCGGCTGTCA
GCGGAGATCG ACCGGCAGGC GACGCTGCTG GCGTGCGGTG ACCTGTTCGT CTGGAGCGCG
GCGATTGCGC TGGCGTGCGC GGTGGCGATT CTCGCGCAGC GGACGTTGCG CTGA
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| Protein sequence | MNTPSTDHTP SAQSAPRRQP AGSTVASRLE LRMVGMVIGL ATGVDYMANL MFSIAGPHIE
GGVLASQDVY LWAVTSYAAA ASLAILVMGR LADRMTYRRH TLLSLLIFIA GTLMCAAAEG
GTMLIFGRAV QGFGGGPMLS TSRIFVQHSP AHERRTMMKG MIYGIFGLTC VSPVLSAALT
EQFGWRAIFV AQLLVAVMVC GLVAAFYPHP HQHERTGDFA SLDWPSAIAF GLAALIALHG
FQQARFVHPD GSPAQVLPIL AVVALVAWIG IRQTGHPLPW VDLRATLQRR FIVGMVFYAI
YYGFASAWSF LSSSLLQNGL GFRYETTAQF MSLSGLVTLL LGIANFQLTD YLPRKHVLIA
IGFVLMAGAM LWLSRTAMPG ASAGVLAPGF VMEGMVGMLV VIQVAGLTYV DLPAEDFGHA
YQFKGIMRAW AQAFGTLLAT LMLQRGQAQH RTDLVGHVSA LTPSWLWPHP LQGAELVRLS
AEIDRQATLL ACGDLFVWSA AIALACAVAI LAQRTLR
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