Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1469 |
Symbol | |
ID | 1220298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1573110 |
End bp | 1573637 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237852 |
Product | putative dehydrogenase oxidoreductase protein |
Protein accession | NP_519590 |
Protein GI | 17546188 |
COG category | [C] Energy production and conversion |
COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.167171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCA GCCTCAGCCT GTCGGTCAAC GGCGCGCCCG TCACCGTCAG CGTCGAACCC CATACCCTGC TGGTCGAGCT GCTGCGCGAG CACCTGAGGC TCACCGGTAC GCATGTCGGC TGCGATACCG CGCAATGCGG CGCCTGCACC GTCCACATGA ACGGCCGCGC GGTGAAGTCG TGCAATATCC TGGCCGTGCA GGCCGACGGC GCGGACGTCA CCACCATCGA AGGCCTGGCC AGGAACGGCA AGCTGCACCC GATGCAGGAA GCCTTCCGCG AATGCCACGG CCTGCAATGC GGCTTCTGCA CGCCGGGCAT GGTGATGGCG GCGACCGCGC TGGTCGCGCA GTACCCCCAT CCCGACGAGC GCCAGGTGCG CGAGCAGCTG GACGGCAACC TGTGCCGCTG CACGGGCTAC CACAACATCG TGCGCGCCGT GCTGCAAGGC GCCGAGGCCA TGGCGGCTGC CGAAGGCGAA GACGCCTCGC TGCAGAGCCT GGCCGCCGCG CGCGCCCATG CCGCCTGA
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Protein sequence | MAISLSLSVN GAPVTVSVEP HTLLVELLRE HLRLTGTHVG CDTAQCGACT VHMNGRAVKS CNILAVQADG ADVTTIEGLA RNGKLHPMQE AFRECHGLQC GFCTPGMVMA ATALVAQYPH PDERQVREQL DGNLCRCTGY HNIVRAVLQG AEAMAAAEGE DASLQSLAAA RAHAA
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