Gene RSc1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1469 
Symbol 
ID1220298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1573110 
End bp1573637 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID637237852 
Productputative dehydrogenase oxidoreductase protein 
Protein accessionNP_519590 
Protein GI17546188 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.167171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA GCCTCAGCCT GTCGGTCAAC GGCGCGCCCG TCACCGTCAG CGTCGAACCC 
CATACCCTGC TGGTCGAGCT GCTGCGCGAG CACCTGAGGC TCACCGGTAC GCATGTCGGC
TGCGATACCG CGCAATGCGG CGCCTGCACC GTCCACATGA ACGGCCGCGC GGTGAAGTCG
TGCAATATCC TGGCCGTGCA GGCCGACGGC GCGGACGTCA CCACCATCGA AGGCCTGGCC
AGGAACGGCA AGCTGCACCC GATGCAGGAA GCCTTCCGCG AATGCCACGG CCTGCAATGC
GGCTTCTGCA CGCCGGGCAT GGTGATGGCG GCGACCGCGC TGGTCGCGCA GTACCCCCAT
CCCGACGAGC GCCAGGTGCG CGAGCAGCTG GACGGCAACC TGTGCCGCTG CACGGGCTAC
CACAACATCG TGCGCGCCGT GCTGCAAGGC GCCGAGGCCA TGGCGGCTGC CGAAGGCGAA
GACGCCTCGC TGCAGAGCCT GGCCGCCGCG CGCGCCCATG CCGCCTGA
 
Protein sequence
MAISLSLSVN GAPVTVSVEP HTLLVELLRE HLRLTGTHVG CDTAQCGACT VHMNGRAVKS 
CNILAVQADG ADVTTIEGLA RNGKLHPMQE AFRECHGLQC GFCTPGMVMA ATALVAQYPH
PDERQVREQL DGNLCRCTGY HNIVRAVLQG AEAMAAAEGE DASLQSLAAA RAHAA