| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1439 |
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| Symbol | tISRso12b |
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| ID | 1220268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1542234 |
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| End bp | 1542938 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637237822 |
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| Product | ISRSO12-transposase ORFB protein |
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| Protein accession | NP_519560 |
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| Protein GI | 17546158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGAGA TCGCCAGCAC CCGGGTACGG TACGGCTTCT GGCGCATTTA CGTGCTGATT
CGTCGCGAGG GTTGGTTGGT CAATCACAAA CGCGTCTACC GCCTGTACAA GGAGGAAGGC
TTGAATCTGC GCACCAAAAG ACCCAGGCGC CGCAAGGCGG CCGCACATAG ACTCGAGCGC
CCGGTGCTCA CCGCACCGAA TCAGAGCTGG AGCATGGATT TCGTATCCGA CGCCTTGTTT
AACGGCAACA AGTTCCGCGC ACTGACTGTG GTGGACAACC ATACGCGGGA ATGCCTGGCG
ATTGAGGCTG CCCCGTCGCT AAACGGCAGT GACGTTGTGC GTGTGTTGCA AGCCATCGTG
ATCCGACGAG GCATGGTGCC CGCACGCATC CAGGCTGACA ACGGGCCGGA ATTTGTGTCG
CTGGCGCTGG ACAAGTGGGC GTATGAGGCA GGCGTAACGC TCGACTTCTC TCGGCCTGGC
AAGCCTACCG ACAATGCCTT CATCGAGTCC TTCAACGGCA GCTTGCGCGA TGAATGCCTG
AACACGTACT GGTTCCTGTC CCTTGAAGAC GCACGCCAAA AGCTCGAAAA CTGGAGGCAC
GATTACAATC ATTTCCGGCC ACATTCGGCG CTGGATGACA CCGCACCAGC GCTCTTTGCA
CGGCAGTTTG CCATTACACC AACCACGCCG GCTTCTCTAG CCTGA
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| Protein sequence | MHEIASTRVR YGFWRIYVLI RREGWLVNHK RVYRLYKEEG LNLRTKRPRR RKAAAHRLER
PVLTAPNQSW SMDFVSDALF NGNKFRALTV VDNHTRECLA IEAAPSLNGS DVVRVLQAIV
IRRGMVPARI QADNGPEFVS LALDKWAYEA GVTLDFSRPG KPTDNAFIES FNGSLRDECL
NTYWFLSLED ARQKLENWRH DYNHFRPHSA LDDTAPALFA RQFAITPTTP ASLA
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