Gene RSc1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1436 
SymboltISRso11b 
ID1220265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1540188 
End bp1541024 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content59% 
IMG OID637237819 
Productisrso11-transposase orfb protein 
Protein accessionNP_519557 
Protein GI17546155 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCGC TGCGTGAGCG GCATTCATTG TCGAGCTTGC TCAAGGCCGC GAATCTCGCA 
CGCAGCACGT ACTACTACCA GATGGCGACA GGCCAGGCAG AGGATCGTCA CGGCGCGCTC
AAGGAGCGCA TTCAGCACAT CTATGCCCAG CACAAGGGCC GATATGGCTA CCGCCGGATC
ACGGCGACGC TCCGTCGGGC AGGGACGTTG GTGAATCACA AGACCGTACA GCGATTGATG
TCGGCGCTAC AGTTGAAGTC ACTCGTGCGG CCGAAGAAAT ACCGCTCTTA CCTCGGGCAA
GTCGGGCGGG TTGCTCCCAA TCTGCTACAG CGCGAGTTTG AGGCGAGCAA GCCGAACGAG
AAGTGGGTAA CGGACGTGAC GGAGTTCAAC GTCGGCGGCA AAAAGCTGTA CCTGTCGCCC
GTCCTGGACC TATACAACGG AGAGATCGTC GCCTGGCAAA CCAGTGAACG ACCTGATTAC
ACGCTGATCC GGGAGATGCT CGACAAGGCG TTGCGCAAGC TGCGCCCGTG CGAGACGCCG
ATGCTGCATT CGGATCAAGG CTGGCCGTAT CAAATGGCAG CGTATCGTCG CAAACTGGCC
GCGCGAGGCC TGCGCCAGAG CATGTCCCGC AAAGGCAACT GCCTAGACAA TGCGGCAATG
GAAAGCTTCT TCGGCACACT CAAGTCAGAG TGCTTCCGGT TAGAGCGCTT CGCGGACATC
GACCAACTGC GACGCGCCAT TGCCGAATAC ATCCGGTACT ACAATCACGA GCGCATCAAG
ATCAAGCTAA AAGGGCTGAG CCCTGTGCAA TACAGGACCC AGCCCTTGGC CGCCTAA
 
Protein sequence
MSALRERHSL SSLLKAANLA RSTYYYQMAT GQAEDRHGAL KERIQHIYAQ HKGRYGYRRI 
TATLRRAGTL VNHKTVQRLM SALQLKSLVR PKKYRSYLGQ VGRVAPNLLQ REFEASKPNE
KWVTDVTEFN VGGKKLYLSP VLDLYNGEIV AWQTSERPDY TLIREMLDKA LRKLRPCETP
MLHSDQGWPY QMAAYRRKLA ARGLRQSMSR KGNCLDNAAM ESFFGTLKSE CFRLERFADI
DQLRRAIAEY IRYYNHERIK IKLKGLSPVQ YRTQPLAA