Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1435 |
Symbol | tRso10b |
ID | 1220264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1539489 |
End bp | 1540091 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637237818 |
Product | ISRSO10-transposase ORFB protein |
Protein accession | NP_519556 |
Protein GI | 17546154 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0927886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTGC ACAGCTTGCT GCTTGAGCGC AGGCCGACGC CACCGCGTCC ACCGCGCCGG CATGACGGCA AGGTCGCCGT GGCCAAGAGC AACCAGCGCT GGTGCTCCGA TGGCTTCGAG TTCCGCTGCG ACAACGGCGA GCCGCTGCGG GTGACGTTCG CGCTGGATTG CTGCGACCGC GAGGCGATGA GCTGGGTGGC GACGACCGGC GGCTACAGCG GCGACGTAGT ACGCGACGTG ATGCTGGCGG CCGTCGAGCA GCGCTTCGGC AATGTTCCGA AAGCGCCAGC GGAAATTGAA TGGCTGACGG ACAACGGCTC AGGCTACATT GCTGGGAAGA CTCGCGAGTT CGCCACGGAC ATTGGCTTGA AGCCATTGAC GACACCGGTT TGCAGCCCGC AGAGCAACGG CATGGCCGAG AGCTTCGTGA AGACGATGAA GCGCGACTAC GTCGCCTTCA TGCCCAAGCC TGACGCGGCC ACAGCGACGC GCAACCTCGC CATCGCGTTC GAGCATTACA ACGAGCAGCA TCCCCATAGC GCACTGAAAT ATCGCTCGCC ACGCGAGTTC AGGCGCAGGA CGGAATCATC AACTCAAGTG TGA
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Protein sequence | MRVHSLLLER RPTPPRPPRR HDGKVAVAKS NQRWCSDGFE FRCDNGEPLR VTFALDCCDR EAMSWVATTG GYSGDVVRDV MLAAVEQRFG NVPKAPAEIE WLTDNGSGYI AGKTREFATD IGLKPLTTPV CSPQSNGMAE SFVKTMKRDY VAFMPKPDAA TATRNLAIAF EHYNEQHPHS ALKYRSPREF RRRTESSTQV
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