Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1427 |
Symbol | |
ID | 1220251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1526285 |
End bp | 1526806 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637237805 |
Product | hypothetical protein |
Protein accession | NP_519548 |
Protein GI | 17546146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0220837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00312062 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGAC TGCACGTCCT GCTGCCGGCT ACCGCCGCCC TCATCGCCCT CGCCTGCCCC GTCCACGCAC AATGGGCCTG GCAATGGCGC GACGAGAAAG GCCAGATGGT CTACAGCGAC GTGGCGCCGC CGCCATCCAT CCCGCCGAGC CGCATCATCC GCAATCCGAA CGGGCAGATG ACCACGGCGT ACGAAGCCCT GCCCACGCCG GCCTCCGGCG TGAAGGCCGC CGATCCGAAG GCGCCCGCCA AACCAGGCCA AGCCGCCCCC GACCCTGACG CCGAACTGCG CAAGCGCTTG GCCGATCGCG CAAAGCGCGA GCAGGAAGAC GCGCAGAAGG CCGAGCAGGC CCAGCGCCGC CAGGCCGACT GCGAGCGCCT GCGCAACGAA ACCACGTACC TGCAGGGCGG CCGCCGCTAT GCCACGCCGC AGGCGGACGG CACGCTCTCC TATATGGATG ACGCTCAGCG CGCCGCCGCC ATCCAACGCA ATCAGACCGA TCTGAGCGCG AACTGCAGCT GA
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Protein sequence | MKRLHVLLPA TAALIALACP VHAQWAWQWR DEKGQMVYSD VAPPPSIPPS RIIRNPNGQM TTAYEALPTP ASGVKAADPK APAKPGQAAP DPDAELRKRL ADRAKREQED AQKAEQAQRR QADCERLRNE TTYLQGGRRY ATPQADGTLS YMDDAQRAAA IQRNQTDLSA NCS
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