Gene RSc1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1427 
Symbol 
ID1220251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1526285 
End bp1526806 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content69% 
IMG OID637237805 
Producthypothetical protein 
Protein accessionNP_519548 
Protein GI17546146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0220837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00312062 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGAC TGCACGTCCT GCTGCCGGCT ACCGCCGCCC TCATCGCCCT CGCCTGCCCC 
GTCCACGCAC AATGGGCCTG GCAATGGCGC GACGAGAAAG GCCAGATGGT CTACAGCGAC
GTGGCGCCGC CGCCATCCAT CCCGCCGAGC CGCATCATCC GCAATCCGAA CGGGCAGATG
ACCACGGCGT ACGAAGCCCT GCCCACGCCG GCCTCCGGCG TGAAGGCCGC CGATCCGAAG
GCGCCCGCCA AACCAGGCCA AGCCGCCCCC GACCCTGACG CCGAACTGCG CAAGCGCTTG
GCCGATCGCG CAAAGCGCGA GCAGGAAGAC GCGCAGAAGG CCGAGCAGGC CCAGCGCCGC
CAGGCCGACT GCGAGCGCCT GCGCAACGAA ACCACGTACC TGCAGGGCGG CCGCCGCTAT
GCCACGCCGC AGGCGGACGG CACGCTCTCC TATATGGATG ACGCTCAGCG CGCCGCCGCC
ATCCAACGCA ATCAGACCGA TCTGAGCGCG AACTGCAGCT GA
 
Protein sequence
MKRLHVLLPA TAALIALACP VHAQWAWQWR DEKGQMVYSD VAPPPSIPPS RIIRNPNGQM 
TTAYEALPTP ASGVKAADPK APAKPGQAAP DPDAELRKRL ADRAKREQED AQKAEQAQRR
QADCERLRNE TTYLQGGRRY ATPQADGTLS YMDDAQRAAA IQRNQTDLSA NCS