| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1422 |
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| Symbol | |
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| ID | 1220246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1523522 |
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| End bp | 1523950 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237800 |
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| Product | hypothetical protein |
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| Protein accession | NP_519543 |
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| Protein GI | 17546141 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00104227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCGGCGC AAGAGATCGT CTGGTTCACG CTGGCGGTGT TGCTCGTCAT TGGTGAGCTG
ATGACGGGAA CGTTCTACCT GCTGATGGTG GCCATCGGGC TGCTGGCGGG CGGCCTGGCC
GCTCTGGCCG GGCTGGGGTT CCCGGTGCAG GCCGTCCTGG CCGCGCTGGT TGCCGTGATC
GGCATCGCCG GGCTGTGGCG CACGCGCTTC GGCCATGCCG CGCGCGAGAA TGCCGCCCGC
AATCGCAACG TCAACCTGGA TATCGGCGAG ATGCTGCGCG TCGATGCGTG GTCGCCCGAG
CGGCGCGCGC GCGTGCAGTA CCGCGGCGCC GAATGGGACG TCGAACTGGC GCCGCCGGCA
CCGGCCACCG GCGGCGAATT CCGTATCGTC GAGGTGCGCG GCAACGTGCT GGTCGTCGCA
CCCAAATAG
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| Protein sequence | MSAQEIVWFT LAVLLVIGEL MTGTFYLLMV AIGLLAGGLA ALAGLGFPVQ AVLAALVAVI
GIAGLWRTRF GHAARENAAR NRNVNLDIGE MLRVDAWSPE RRARVQYRGA EWDVELAPPA
PATGGEFRIV EVRGNVLVVA PK
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